Pairwise Alignments

Query, 395 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas putida KT2440

Subject, 406 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score =  107 bits (267), Expect = 6e-28
 Identities = 87/347 (25%), Positives = 150/347 (43%), Gaps = 10/347 (2%)

Query: 1   MNRPAGSLRRHLCSTLLILLCLLGVFPL--DVILPSFPALSDEFRVDTKQIAYSVSFFAV 58
           ++ P     R   S  L+L  LL   P+  D  LP+ PA++ E        + S++ F +
Sbjct: 1   VSAPGARKGRFDISFALLLPLLLAAQPVATDSYLPALPAIAKELG----SASTSLTLFVL 56

Query: 59  GVAMAQIVIGPLSDGIGRKRLLLAGLSVSIVGALGCVFSTHYETFMAFRLVQALGCGS-L 117
               AQ++ GPL+D  GR+ +LLAGL   ++ ALG  F+        +R +Q     + L
Sbjct: 57  AFGFAQLLCGPLADRFGRRPVLLAGLGCYVLAALGGAFADSVALLAGWRALQGFSMAAIL 116

Query: 118 VLGQALVQDLYSGTQRNAMRILLTSASGLFISLSPLAGAFLQQSFGWEASFTVFVIIAAI 177
           V  +A V+DLY   +   +     +  G+   L+PL GA+L Q  GW        + A++
Sbjct: 117 VCSRAAVRDLYPAHEGPHVMARGLTGLGVVGLLAPLLGAWLVQGAGWRWVMVAMAVYASV 176

Query: 178 VSLLSCVLLHDT--PASHD-RAPSMSSYRVMLRDTDYLAHSMLSSLAFACHFSFIVIAPL 234
           +  +      +T  P   D  +    S R +     + A + +++  +   F F++++P+
Sbjct: 177 LFAMCWYSFAETRKPMGEDGLSAPRGSTRTVFASRSFRAWASVAASTYGGLFCFLLLSPM 236

Query: 235 LLMGRLELTAYQFSLVFIGYGLAYIVGGMAAAYLNSRVSPQTQIKAGLLLISTAGITLLM 294
           + +G L  +   +  +  G  L YI        L  R  P   ++ G  L  T  +   +
Sbjct: 237 VYIGYLGWSPAWYGWIPAGGSLVYIFSTTMCRTLLRRYGPVRTVRLGASLSITGAVIQAL 296

Query: 295 WEWVAGLSVLGALLPMIVCTTGTTLVRPAATTQALARYPRQAGAAAS 341
             W+  LS +  L    V   G  + +P     A+   P  AG A S
Sbjct: 297 GCWLMPLSAVPLLFGHAVYCLGHGIHQPCGQAGAVGDLPHLAGRAVS 343