Pairwise Alignments

Query, 395 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas putida KT2440

Subject, 403 a.a., putative arabinose efflux transporter from Escherichia coli BL21

 Score =  144 bits (363), Expect = 4e-39
 Identities = 98/346 (28%), Positives = 172/346 (49%), Gaps = 5/346 (1%)

Query: 20  LCLLGVFPLDVILPSFPALSDEFRVDTKQIAYSVSFFAVGVAMAQIVIGPLSDGIGRKRL 79
           L +LG    D+ LP+F A+  + +     ++ S+S F  G A AQ++ GPLSD  GRK +
Sbjct: 14  LSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPV 73

Query: 80  LLAGLSVSIVGALGCVFSTHYETFMAFRLVQALG-CGSLVLGQALVQDLYSGTQRNAMRI 138
           LL GL++  +G+LG ++  +  T +  R VQA+G C + V+ QALV D Y   + N +  
Sbjct: 74  LLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFA 133

Query: 139 LLTSASGLFISLSPLAGAFLQQSFGWEASF-TVFVIIAAIVSLLSCVLLHDTPASHDRAP 197
            +    GL  +L+PL G++L   F W+A F T+F I   +V +L    L  T  + + + 
Sbjct: 134 TIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAI--TVVLILPIFWLKPTTKARNNSQ 191

Query: 198 SMSSYRVMLRDTDYLAHSMLSSLAFACHFSFIVIAPLLLMGRLELTAYQFSLVFIGYGLA 257
              ++  +LR   Y  + ++ +   A  F+++  +P +L   +  +     L ++   +A
Sbjct: 192 DGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFIL-SEMGYSPAVIGLSYVPQTIA 250

Query: 258 YIVGGMAAAYLNSRVSPQTQIKAGLLLISTAGITLLMWEWVAGLSVLGALLPMIVCTTGT 317
           +++GG        +   +  +   L+L + + I      +++ +S++  L+P  V     
Sbjct: 251 FLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIAN 310

Query: 318 TLVRPAATTQALARYPRQAGAAASLNTTLLFAGAGLTSSVVAGLES 363
             + P    QAL  +P   G AA+L  TL      L S VV+ L S
Sbjct: 311 GAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLIS 356



 Score = 24.3 bits (51), Expect = 0.007
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 12/55 (21%)

Query: 297 WVAGLSVLGALLPMIVCTTGTTLVRPA-ATTQALARYPRQAGAAASLNTTLLFAG 350
           W+AGLSVLG L         T +  PA A  QA  + P    +A S + +L  AG
Sbjct: 10  WLAGLSVLGFL--------ATDMYLPAFAAIQADLQTP---ASAVSASLSLFLAG 53