Pairwise Alignments

Query, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

Subject, 391 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

 Score =  174 bits (440), Expect = 6e-48
 Identities = 123/381 (32%), Positives = 191/381 (50%), Gaps = 27/381 (7%)

Query: 35  PAHKEAGGVRGGKG------MGMIGG-------RPGFGGSSDPV--PVRVVPVRIG---- 75
           P   ++GG  G K       + ++GG       +P    S      P RVV V  G    
Sbjct: 7   PGSAKSGGSAGRKMVLAVLFLALLGGGAWVWDKKPWLAASGQKAAPPPRVVAVLAGKAER 66

Query: 76  -DFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPRPYRIALQQ 134
              P+  +ALGTV +  TV VRSRVA  + K+ F +G  VK GDLL ++DPR     + Q
Sbjct: 67  TSLPVRVEALGTVESMVTVPVRSRVAAAVEKVGFADGATVKEGDLLYQLDPRVIDAQILQ 126

Query: 135 AEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKTNQAQVNDA 194
           AE TL +++ QL+    D+ RY GL   +++++  +D A       + +V  ++A +   
Sbjct: 127 AEATLNRDKVQLEKNLRDVERYAGLATRNAVSQVQVDDARTTADVQKAVVAQDEANLTAL 186

Query: 195 RLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTEPINVAFTLPETELSTVL 254
           R+   + +IR+P +GR+G+  +  G ++  +DT  L  + Q  PI VAF LPE  ++ + 
Sbjct: 187 RVQRGYYEIRSPATGRIGVSSVRPGTVIRVDDT--LATVRQLAPIYVAFGLPERYIAGL- 243

Query: 255 ERYRSGASLPVEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLKFKGRFENKDLALFPNQFV 314
              R+     V    +G  +  S G +  IDN I+  TGTL  +  F N D  L+P    
Sbjct: 244 ---RAAKDAKVSFTIQGTGETISGGTVAVIDNTIEPQTGTLTARAIFPNADERLWPGALG 300

Query: 315 NVRLLADTLKQVVMAPAAAIQFGNDGTFAYVVNEQSTVNVRKLKVGASDGENSVILDGLK 374
            V +       VV  P+ A+Q G DG F ++V++    +VR + V  +    SVI  GL 
Sbjct: 301 AVTVTLRIEDNVVAVPSEAVQNGQDGPFVFIVDD-GIAHVRPVTVTRTVDGRSVIAKGLD 359

Query: 375 AGDRLVLEGTDRLREGTKVEV 395
            G+ +V +G   LREG++V V
Sbjct: 360 GGETVVTDGQLSLREGSRVSV 380