Pairwise Alignments

Query, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

Subject, 388 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

 Score =  268 bits (684), Expect = 3e-76
 Identities = 148/332 (44%), Positives = 205/332 (61%), Gaps = 1/332 (0%)

Query: 64  PVPVRVVPVRIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEI 123
           P+PV    V+  D P+Y + +GTV A+NT+ V+ RV GEL K+ FKEGQ VKAGD+LA+I
Sbjct: 40  PIPVIATAVKTEDVPVYGEGIGTVQASNTITVKVRVDGELTKVVFKEGQEVKAGDILAQI 99

Query: 124 DPRPYRIALQQAEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGL 183
           D RP+  AL QA+   A+++A L NA+ D  RYK L  + + ++Q LDT  A VAQ+Q  
Sbjct: 100 DQRPFAAALAQAKAARAKDEALLANAKADYDRYKVLVPKQAASQQQLDTQSALVAQYQAQ 159

Query: 184 VKTNQAQVNDARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTEPINVAF 243
           +  ++A +++A++ LD+T IRAPISGR G+R +D GN+V AND   LVVITQ +P+ V F
Sbjct: 160 ISGDEAAIDNAQIQLDYTTIRAPISGRTGVRLVDEGNIVHANDGGGLVVITQLKPVAVVF 219

Query: 244 TLPETELSTVLERYRSGASLPVEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLKFKGRFEN 303
           TLP+  L  +      G  +   A+ R        G +  IDNQI + TGTL+ K  F N
Sbjct: 220 TLPQDRLDDMQAALARG-PVSALAFRRDGVTEVGEGTVALIDNQISSDTGTLRIKAVFPN 278

Query: 304 KDLALFPNQFVNVRLLADTLKQVVMAPAAAIQFGNDGTFAYVVNEQSTVNVRKLKVGASD 363
            DL L+P  FVNV++L DT   V+  PA AIQ G DG + YVV   +TV  R +      
Sbjct: 279 DDLKLWPGAFVNVKVLLDTHHNVITIPAQAIQRGPDGFYVYVVKPDATVEKRAVTTSGIS 338

Query: 364 GENSVILDGLKAGDRLVLEGTDRLREGTKVEV 395
              + I  GL AGD++V++G  +L  G +V V
Sbjct: 339 AGIASIATGLVAGDQVVIDGQYKLIPGARVTV 370