Pairwise Alignments

Query, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

Subject, 388 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

 Score =  239 bits (609), Expect = 1e-67
 Identities = 147/395 (37%), Positives = 220/395 (55%), Gaps = 31/395 (7%)

Query: 13  LVGLLILLLVAALAWWLWPAATPAHKEAGGVRGGKGMGMIGGRPGFGGSSDPVPVRVVPV 72
           + G+L++L VAA     W    PA  +                     +   +PVRVV V
Sbjct: 10  IAGVLVVLAVAA-----WALTRPAKSKLA-------------------APTAIPVRVVSV 45

Query: 73  RIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPRPYRIAL 132
              D P +   +G+V + ++V +R +V G L K+  KEGQ VKAGDLLA ID R  R +L
Sbjct: 46  AQQDIPRFVSGIGSVLSLHSVVIRPQVDGILTKLLVKEGQLVKAGDLLATIDDRSIRASL 105

Query: 133 QQAEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKTNQAQVN 192
            QA+  L ++QAQL+ A V+L RYK L  +D ++KQT D  +A V Q +   + NQA ++
Sbjct: 106 DQAKAQLGESQAQLQVALVNLKRYKALSVDDGVSKQTYDQQQALVNQLKATAQGNQAAID 165

Query: 193 DARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTEPINVAFTLPETELST 252
            A++ L +TQIR+P+SGRVG+R +D GN +  +D   L  +TQ +PI V F+LP+  L T
Sbjct: 166 SAQVQLSYTQIRSPVSGRVGIRTVDEGNFLRTSDAQGLFSVTQIDPIAVEFSLPQQMLPT 225

Query: 253 VLERYRSGASLPVEAWDRGDSKLQSTGVLGS-----IDNQIDTTTGTLKFKGRFENKDLA 307
           +     +     V+A+   D+  Q+  +LG      IDNQI +TTGTL+ K  F N    
Sbjct: 226 LQGLIAAPTQASVDAYLGADTDGQTGDLLGEGHLSLIDNQISSTTGTLRAKAEFNNASQR 285

Query: 308 LFPNQFVNVRLLADTLKQVVMAPAAAIQFGNDGTFAYVVNEQSTVNVRKLKVGASDGENS 367
           L+P Q V +++     K  ++ P   +Q G D  F Y VN    V+V  ++V   D + +
Sbjct: 286 LWPGQLVTIKIQTALDKNALVVPPTVVQRGLDSHFVYRVNGDK-VDVVPVQVTYQDSDVN 344

Query: 368 VILDGLKAGDRLVLEGTDRLREGTKVEVVEDSSQV 402
           +I  G++AGD LV +G  RL+ G +VEV+++  QV
Sbjct: 345 II-KGVQAGDVLVSDGQSRLKAGAQVEVLKEPPQV 378