Pairwise Alignments

Query, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

Subject, 433 a.a., secretion protein HlyD from Pseudomonas simiae WCS417

 Score =  565 bits (1455), Expect = e-165
 Identities = 292/430 (67%), Positives = 343/430 (79%), Gaps = 9/430 (2%)

Query: 4   SNSRSLRRWLVGLLILLLVAALAWWLWPAATPAHKEAGGVRGGKGMGMIGGRPGFGGSSD 63
           S+ R  RRWL GLL+LL++A L W  WP +     E      GK  GM+  RPGFGGS+ 
Sbjct: 8   SSPRKSRRWLFGLLVLLVIAGLCWKFWPGSHKDGAEKPAGHAGK-TGMM--RPGFGGSTG 64

Query: 64  PVPVRVVPVRIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEI 123
           PVPVRV P  +G+FP+YYKALGTVTA NT+NVRSRV GELVKI F+EGQ VKAGDLLAEI
Sbjct: 65  PVPVRVAPAVLGEFPVYYKALGTVTALNTINVRSRVGGELVKIAFEEGQMVKAGDLLAEI 124

Query: 124 DPRPYRIALQQAEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGL 183
           DPR Y+ AL QA+GTL QNQAQLKNAQVD+ RY+ LYA+DSIAKQTLDTAEA V Q+QG 
Sbjct: 125 DPRSYQNALLQAQGTLMQNQAQLKNAQVDVQRYRDLYAQDSIAKQTLDTAEALVLQYQGT 184

Query: 184 VKTNQAQVNDARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTEPINVAF 243
           VKTNQ  V+DA+LNL+FT+IRAPISGRVGLRQ+D+GNLVAANDTT L VITQT+PI+VAF
Sbjct: 185 VKTNQGAVDDAKLNLEFTKIRAPISGRVGLRQVDVGNLVAANDTTFLAVITQTQPISVAF 244

Query: 244 TLPETELSTVLERYRSGASLPVEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLKFKGRFEN 303
           TLPE  L TVL RY +G  LPVEAWDRGD K Q+ GVL S+DNQID TTGTLKFK RF+N
Sbjct: 245 TLPENTLETVLTRYHAGNKLPVEAWDRGDVKQQAVGVLQSLDNQIDVTTGTLKFKARFDN 304

Query: 304 KDLALFPNQFVNVRLLADTLKQVVMAPAAAIQFGNDGTFAYVVNEQSTVNVRKLKVGASD 363
           KD ALFPNQFVNV LLADTL  VV+AP+AAIQFGN GTF YV++    V V+ L VG +D
Sbjct: 305 KDQALFPNQFVNVHLLADTLHNVVLAPSAAIQFGNTGTFVYVLDGDKKVKVQPLVVGDTD 364

Query: 364 GENSVILDGLKAGDRLVLEGTDRLREGTKVEVVEDSSQVPTSPGQHLQGQEAKGAAQTGE 423
           G+N+VI +GLKAGDR+VLEGTDRL++G+++EVV DSS+VPT+P +HLQG+ A       +
Sbjct: 365 GDNTVIKEGLKAGDRVVLEGTDRLKDGSEIEVVNDSSEVPTTPTEHLQGKPA------AK 418

Query: 424 AQPGNAAGKA 433
            + G  AGKA
Sbjct: 419 GETGTTAGKA 428