Pairwise Alignments

Query, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

Subject, 411 a.a., Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA from Variovorax sp. SCN45

 Score =  252 bits (643), Expect = 2e-71
 Identities = 153/384 (39%), Positives = 222/384 (57%), Gaps = 20/384 (5%)

Query: 12  WLVGLLILLLVAALAWWLWPAATPAHKEAGGVRGGKGMGMIGGRPGFGGSSDPVPVRVVP 71
           WL    +++L+   AW L   +  A K                 P    +  PV V  V 
Sbjct: 22  WLAAATLVVLLGGGAWALTQQSAHAAK-----------------PEAAQAPPPVQVTTVR 64

Query: 72  VRIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPRPYRIA 131
           V+  +   Y   +GTV +  TV V++R+ G+L K+ F EGQ VKAG +LA++DPR  +  
Sbjct: 65  VKQQEVQTYRSGIGTVASMATVTVKARIDGQLDKVGFVEGQDVKAGQMLAQLDPRTLQAQ 124

Query: 132 LQQAEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKTNQAQV 191
           L QA+ T A++QA L NA+ DL RY  L A+D+  +Q LDT +A V Q +  V+ + AQV
Sbjct: 125 LAQAQATRAKDQATLVNARADLKRYTTLIAQDAATQQQLDTQKALVNQLEATVQNDAAQV 184

Query: 192 NDARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTEPINVAFTLPETELS 251
             A + L FT+I +P+ GRVG R +D GN+V A DT  LVVI Q +PI V FTLPE  + 
Sbjct: 185 QYAEVQLSFTRISSPMDGRVGARLVDPGNIVHAADTNGLVVINQIDPIAVQFTLPEDAVQ 244

Query: 252 TVLE-RYRSGASLPVEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLKFKGRFENKDLALFP 310
            +   + +S   L V A+DR  +++  TG L  ++NQIDTT+GT++ KG F N   AL+P
Sbjct: 245 DINRLQQKSSQPLSVVAYDRSGAQMLGTGKLILLNNQIDTTSGTVQLKGSFANPQHALWP 304

Query: 311 NQFVNVRLLADTLKQVVMAPAAAIQFGNDGTFAYVVNEQSTV-NVRKLKVGASDGENSVI 369
            Q+VNVRL  +     +  PAAA+Q G D T+ +VV++++ V NV    V  +DG  +VI
Sbjct: 305 GQYVNVRLQLERRPDSLTVPAAAVQRGQDNTYVWVVDDENKVSNVPVHVVQIADG-TAVI 363

Query: 370 LDGLKAGDRLVLEGTDRLREGTKV 393
             GL    R+V++G  +L+ G+ V
Sbjct: 364 DKGLSVNQRVVVDGQYKLKPGSTV 387