Pairwise Alignments

Query, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

Subject, 396 a.a., RND efflux system, membrane fusion protein from Sphingobium sp. HT1-2

 Score =  176 bits (446), Expect = 1e-48
 Identities = 117/367 (31%), Positives = 185/367 (50%), Gaps = 8/367 (2%)

Query: 64  PVPVRVVPVRIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEI 123
           P  V VV ++    PL  +  G ++A  T  VR +++G + +  F EG  V+AG LL EI
Sbjct: 31  PPSVGVVTLKTESAPLLNELPGRISAFETAEVRPQISGVIRRRLFTEGGTVQAGQLLYEI 90

Query: 124 DPRPYRIALQQAEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGL 183
           +  PYR AL QA+G+LA  QA +++  +   RYK L   ++++KQ  D A A   Q +  
Sbjct: 91  EDAPYRAALAQAQGSLANAQAAIRSTGLQAQRYKDLVGINAVSKQEYDDAAAAAQQARAN 150

Query: 184 VKTNQAQVNDARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTEPINVAF 243
           V   Q  V  A++N +FT+IRAPISGR+G   L  G LV       L  I +T+ + V  
Sbjct: 151 VAAQQGAVQAAQVNQNFTRIRAPISGRIGRSLLTPGALVQTGQADPLTTIQRTDRVYVDV 210

Query: 244 TLPETELSTVLERYRSGA-----SLPVEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLKFK 298
           T    ++  + +  ++G         ++      S     G L   D  +D+++G +  +
Sbjct: 211 TQSAAQIIDLKQAMKAGGISEAQGARIQLILPNGSVYPGEGRLQFADVTVDSSSGAVTLR 270

Query: 299 GRFENKDLALFPNQFVNVRLLADTLKQVVMAPAAAIQFGNDG-TFAYVVNEQSTVNVRKL 357
             F N D  L P  +V  +L+     Q ++AP   I     G   A VV + + V +R++
Sbjct: 271 AIFPNADGLLLPGMYVRAKLIEGERTQAILAPQQGISRDARGRATAMVVGKDNKVEMRQV 330

Query: 358 KVGASDGENSVILDGLKAGDRLVLEGTDRLREGTKVEVVEDSSQVPTSPGQHLQGQEAKG 417
            V  + G+  ++  GLK GD+L++EG   LR GT V+    + Q  T+P    +   A+G
Sbjct: 331 TVDRAIGDKWIVTSGLKPGDQLIVEGLVNLRPGTVVK--PGAPQQVTAPEGGAKPAAAQG 388

Query: 418 AAQTGEA 424
           A+  GEA
Sbjct: 389 ASNAGEA 395