Pairwise Alignments

Query, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

Subject, 391 a.a., Multidrug efflux RND membrane fusion protein from Pseudomonas putida KT2440

 Score =  169 bits (428), Expect = 1e-46
 Identities = 112/356 (31%), Positives = 182/356 (51%), Gaps = 20/356 (5%)

Query: 67  VRVVPVRIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPR 126
           VRV  +++    +  +  G + A  T  VR+RVAG ++K  ++EG  VK GD+L  IDP 
Sbjct: 40  VRVETLQLQPLAISSELSGRILAPRTAEVRARVAGVVLKRVYREGSDVKQGDVLFLIDPA 99

Query: 127 PYRIALQQAEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKT 186
           P++     A  TLA+ +A    A++   RY+ L  + ++++Q  D A+A   Q    V  
Sbjct: 100 PFKADHDSARATLAKAEATRYQARLQEQRYRELVDDKAVSRQEYDNAKASFLQADAEVAE 159

Query: 187 NQAQVNDARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTEPINVAFTLP 246
            +A +  ARLNL +  + APISGR+G  Q+  G LV  N+TT L  I Q +PI+   T  
Sbjct: 160 ARAALERARLNLGYATVTAPISGRIGRAQVTEGALVGQNETTPLATIQQLDPIHADVTQS 219

Query: 247 ETELSTVLERYRSGASLPVEAWDRGDSKLQST------------GVLGSIDNQIDTTTGT 294
             EL+ +    R+G     E    GD + ++T            G L   D  +D +T  
Sbjct: 220 TRELNALRRALRAG-----ELQQVGDGQARATLIQDDGSAYPLPGKLLFSDISVDPSTNQ 274

Query: 295 LKFKGRFENKDLALFPNQFVNVRLLADTLKQVVMAPAAAIQFGNDGT-FAYVVNEQSTVN 353
           +  +  F N DL L P  +V VRL      + +  P  AI   + G     VV++ + V+
Sbjct: 275 ITLRSEFPNPDLDLLPGSYVRVRLEQAVQPKGLSVPQRAILRDSAGVPKVLVVDQHARVS 334

Query: 354 VRKLKVGASDGENSVILDGLKAGDRLVLEGTDRLREGTKVEVVEDSSQVPTSPGQH 409
            R++ +G++ G+  ++ +GL AG+R+V+EG   ++ G +V+V  D++       QH
Sbjct: 335 DRQVVLGSAQGDRWIVSEGLAAGERVVVEGLQHVKAGDQVQV--DNTPAAPPIAQH 388