Pairwise Alignments

Query, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

Subject, 429 a.a., efflux RND transporter periplasmic adaptor subunit from Paraburkholderia sabiae LMG 24235

 Score =  183 bits (464), Expect = 1e-50
 Identities = 115/358 (32%), Positives = 183/358 (51%), Gaps = 8/358 (2%)

Query: 69  VVPVRIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPRPY 128
           VV   I D+  Y    G + A   V+VR  V+G +V ++F++G  VK GD+L  IDPRPY
Sbjct: 53  VVQKTITDWQTYS---GRLQAVEKVDVRPLVSGTIVSVNFQDGALVKKGDVLFVIDPRPY 109

Query: 129 RIALQQAEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKTNQ 188
           +  + +A   LA  Q++    Q D  R + L  +++IAK+  D  +    +    VK  Q
Sbjct: 110 QAEVDRAAAQLAAAQSRSGYTQSDWERAQRLIGDNAIAKRDYDEKQNAAREANANVKAAQ 169

Query: 189 AQVNDARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTA-LVVITQTEPINVAFTLPE 247
           A +  A++NL +T+I AP+SGRV   ++ LGN+V A  + A L  +    PI   F   E
Sbjct: 170 AALEAAQINLGYTKIVAPVSGRVSRAEITLGNVVNAGASAAPLTTLVSVSPIYAEFDADE 229

Query: 248 TELSTVLERYRSGASLPVEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLKFKGRFENKDLA 307
                 + + ++   +PVE     ++     G + S+DN++DT++GT++ + RF+N D A
Sbjct: 230 QTYLQYISQVKNDGKVPVELGLANETGYSRKGTIQSVDNRLDTSSGTIRVRARFDNADGA 289

Query: 308 LFPNQFVNVRLLADTLKQVVMAPAAAIQFGNDGTFAYVVNEQSTVNVRKLKVGASDGENS 367
           L P  +  V++        ++   AAI    D  F +VV++   V  R+++ G   G   
Sbjct: 290 LVPGLYARVKVGGSEPHSALLIDDAAIGTDQDKKFVFVVDKDDHVAYREIQQGDLQGSLR 349

Query: 368 VILDGLKAGDRLVLEGTDRLREGTKVEVVEDSSQVPTSPGQHLQGQEAKGAAQTGEAQ 425
           V+  GL AGDR+V+ GT R+R G +V     +  VP   G       A  A    +AQ
Sbjct: 350 VVKSGLHAGDRIVVNGTQRVRPGAQVR----AHMVPMGDGDANSAPVADDAKAEKQAQ 403