Pairwise Alignments

Query, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

Subject, 386 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  167 bits (424), Expect = 4e-46
 Identities = 110/313 (35%), Positives = 156/313 (49%), Gaps = 6/313 (1%)

Query: 85  GTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPRPYRIALQQAEGTLAQNQA 144
           G   A + V +R+RV G L ++HF +GQ V  GDLL  IDPRPY IAL  A   L Q   
Sbjct: 68  GQFAAVDYVEIRARVNGYLTEVHFTDGQLVNKGDLLFVIDPRPYEIALASARAKLDQAMG 127

Query: 145 QLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKTNQAQVNDARLNLDFTQIR 204
             + A+  L+R   L+ ++ +A+ TLD    +       V+  +A V DA LNL FT++ 
Sbjct: 128 TKEYAKRQLSRAGELHRKEFVAESTLDQRTEESRGAGATVEAARAAVRDAELNLQFTRVT 187

Query: 205 APISGRVGLRQLDLGNLVAANDT----TALVVITQTEPINVAFTLPETELSTVLERYRSG 260
           APISGR+G +Q+ +GNLV    T    T L  I   +PI+V F L E +     +R  + 
Sbjct: 188 APISGRIGAKQVSIGNLVTGGPTVASPTLLSTIVSQDPIHVTFDLTEADYLAQAKR-GNA 246

Query: 261 ASLPVEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLKFKGRFENKDLALFPNQFVNVRLLA 320
              PV+     ++     G L  +DNQID  TGT++ +    N +  +    F  VRL  
Sbjct: 247 VGTPVQLRLMSETGWPREGKLDFVDNQIDKGTGTIRARAVLANAEGQVPSGAFGRVRLAT 306

Query: 321 DTLKQVVMAPAAAIQFGNDGTFAYVVNEQSTVNVRKLKVGASDGENSVILDGLKAGDRLV 380
                 +M P  AI           V +  TV  + + +G  DGE  VI DGL   D+++
Sbjct: 307 SVPYTSLMVPDTAIVTDQARKLVMTVKD-GTVVPKPVVLGPKDGELRVIRDGLAPDDQVI 365

Query: 381 LEGTDRLREGTKV 393
           + G  R R G KV
Sbjct: 366 INGLMRARPGAKV 378