Pairwise Alignments

Query, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

Subject, 396 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

 Score =  188 bits (477), Expect = 3e-52
 Identities = 116/337 (34%), Positives = 180/337 (53%), Gaps = 8/337 (2%)

Query: 65  VPVRVVPVRIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEID 124
           +PV V  V   D   + +  G + A + V +RSRVAG++  +HF+EG  VK GD L  ID
Sbjct: 48  IPVTVAKVESRDVMRWEEFSGRLEAVDRVQIRSRVAGQIKAVHFREGALVKEGDPLFTID 107

Query: 125 PRPYRIALQQAEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLV 184
           P PY+ A+  AEG +A  +A++  A+ +L R + L    +I++  LD  ++  A  +  +
Sbjct: 108 PAPYQAAVAGAEGQVASAEAKVSLAKTELDRGRRLSDNRTISQSDLDQRQSSFADAEAQL 167

Query: 185 KTNQAQVNDARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTT-ALVVITQTEPINVAF 243
           +  +A +  A+L+L +T+I AP+SGRVG  ++  GNLVAA  T+ AL  +    PI  +F
Sbjct: 168 RAARAALTTAQLDLGYTEIIAPVSGRVGRIEITAGNLVAAGSTSPALTTLVSVNPIYASF 227

Query: 244 TLPETELSTVLERY--RSGA-----SLPVEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLK 296
              E  ++  L       GA      +PVE     D      G L  IDNQ+D+ +GT+ 
Sbjct: 228 NASEGVVAKALAELPKTDGALPALEQIPVEIGTLSDEGTPIKGTLHLIDNQVDSASGTIG 287

Query: 297 FKGRFENKDLALFPNQFVNVRLLADTLKQVVMAPAAAIQFGNDGTFAYVVNEQSTVNVRK 356
            +  F+N D  L P QFV VR+     +  ++    AI    D  F +VV+ ++ V+ R+
Sbjct: 288 VRAIFDNPDGRLIPGQFVRVRMGEPKPENRIVISDRAIGTDQDKRFVFVVDAENKVSYRQ 347

Query: 357 LKVGASDGENSVILDGLKAGDRLVLEGTDRLREGTKV 393
           +K GA      +I  GL AGD +V+ G  R+R G  +
Sbjct: 348 IKPGAPADGQRIIDSGLAAGDTIVVNGLQRIRPGATI 384