Pairwise Alignments

Query, 1032 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1079 a.a., efflux RND transporter permease subunit from Rhodanobacter sp000427505 FW510-R12

 Score = 1025 bits (2649), Expect = 0.0
 Identities = 540/1060 (50%), Positives = 744/1060 (70%), Gaps = 44/1060 (4%)

Query: 1    MNLSRLFILRPVATTLSMLAIVLAGLIAYKLLPVSALPQVDYPTIRVMTLYPGASPQVMT 60
            M  S LFI RP+AT+L M+A++L G++ Y+ LPVSALP+++ P++ V T YPGAS   M 
Sbjct: 1    MGFSTLFIRRPIATSLLMVAVLLLGILGYRQLPVSALPEIEAPSLVVSTQYPGASASTMA 60

Query: 61   SAVTAPLERQFGQMPGLEQMASTSSGGASVLTLRFNLDMNMDVAEQQVQAAINAASNLLP 120
            + +T PLER  GQ+ GL  M+S SS G S + L+F++D ++D+A Q VQAAIN A   LP
Sbjct: 61   ALITTPLERNLGQISGLTMMSSDSSAGLSTIILQFSMDRDIDIAAQDVQAAINQAKGTLP 120

Query: 121  SDLPAPPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKLAQISGVGMVSIAGG 180
             +LP PPVYN+VNPAD P+LTL ++S +  L ++NDL D+ +AQKL+Q+ GVG+VSIAG 
Sbjct: 121  GNLPYPPVYNRVNPADAPILTLKLTSDSRQLREVNDLADSIIAQKLSQVQGVGLVSIAGN 180

Query: 181  QRQAVRIKVNVDALAANGLNLDDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEE 240
             R AVR++VN   L+  GL ++DVR+ +  +NVN PKG  +G T+   +  NDQL    E
Sbjct: 181  VRPAVRVQVNPAQLSNLGLTMEDVRSALTQANVNAPKGTLNGKTQSYSIGTNDQLSDAAE 240

Query: 241  YANLILAYNNGAPLRLKDVAEIVDGAENERLAAWANENHAVLLNIQRQPGANVIEVVDRI 300
            Y N I++Y N +P+RL DVA +VDG EN++LAAWAN   AVLL+++RQPGAN+++ V++I
Sbjct: 241  YKNTIISYKNNSPVRLSDVANVVDGVENDQLAAWANGQPAVLLDVRRQPGANIVQTVEQI 300

Query: 301  KGLLPSITDNLPAGLDVSVLTDRTQTIRAAVKDVQHELLIAIVLVVMVTFVFLRRFSATL 360
            + +LP +   LPA + + V  DRT TIRA+V+DV+  L++ + LV+ V FVFLRR  AT+
Sbjct: 301  RRVLPELRSALPADVHLDVFADRTVTIRASVRDVEFTLILTVFLVIGVIFVFLRRLWATI 360

Query: 361  IPSIAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRHIEEGETP 420
            IPS+AVPLSL+GTFGVM   G S++NL+LMALT+ATGFVVDDAIVM+ENI R+IE+G+  
Sbjct: 361  IPSVAVPLSLMGTFGVMAFTGMSLDNLSLMALTVATGFVVDDAIVMIENIVRYIEQGKDG 420

Query: 421  MQAALKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLT 480
             +AA  GA++IGFT++SLT SL+AV +PLL M  V GRLF EFA  L +A+ IS++VSLT
Sbjct: 421  KEAAEVGAKEIGFTVLSLTVSLVAVFLPLLLMPGVTGRLFHEFAWVLTIAVTISMLVSLT 480

Query: 481  LTPMMCARLLKRE--PKEEEQGRFYRASGAWIDW--LIQHYGSALQWVLKHQPLTLLVAV 536
            LTPMMCA LLK +  P+ ++    + A+G    W   +  Y  +L WVL HQ LT+LVA 
Sbjct: 481  LTPMMCAYLLKPDQLPEGDDAHERHAAAGKRTVWSRTVSLYERSLDWVLDHQRLTMLVAG 540

Query: 537  ASLVLTVFLYMVVPKGFFPVQDTGVIQGISEAPQSTSFAAMSERQQALSKVILQDPAVQS 596
            A++VLTVFLY+V+PKG  P QDTG+I G+ +A  + +F  M +R +A+++ + +DPAV  
Sbjct: 541  AAVVLTVFLYIVIPKGLLPEQDTGLITGVVQADDNIAFPQMEDRTKAVAEALRKDPAVAG 600

Query: 597  LSSYIGVDGDNATLNSGRLLINLKPHGERDVSASEVISRLQPQVDRLVGIRLFMQPVQDL 656
            ++++IG    N TLN G+L I LK  G+RD    E++ RLQ  V  + G+ L+++PVQD+
Sbjct: 601  VAAFIGAGTINPTLNQGQLSIVLKDRGDRD-GLDELLPRLQHAVAGIPGVALYLKPVQDV 659

Query: 657  SIEDRVSRTQYQFSLSSPDADLLAQWSGKLVQALQQRPELADVASDLQDKGLQVYLVIDR 716
            +++ RV+ T+YQ+SLS+  +  LA ++ ++ QA++QRPELADV ++L D G  + L IDR
Sbjct: 660  TLDSRVAATEYQYSLSAVKSSELAGYANQMTQAMRQRPELADVDNNLADNGNALKLTIDR 719

Query: 717  DMASRLGISVSQITNALYDAFGQRQISTIYTQASQYRVVLQ------------------- 757
            + ASRLG+ V  I + LYDAFGQRQISTI+TQ +QYRVVL+                   
Sbjct: 720  EKASRLGVPVQTIDDTLYDAFGQRQISTIFTQLNQYRVVLEVAPEFRTSDDLLTKLTVRG 779

Query: 758  SSDAATIGPQALESIHVKATD-------------------GGQVRLSALARIEQRQAQLA 798
            + + A  G  A     +K+++                   GG + LS+L   +   A L 
Sbjct: 780  NGNGALTGSTATSFGQLKSSNSATPSGIGNTGNIGFEIGAGGSIPLSSLVSAQMTSAPLV 839

Query: 799  ISHIGQFPAVTLSFNLAHGASLGEAVQVIEQVQKDIGMPLGVQTRFQGAAEAFQASLSST 858
            +SH  Q PAVTL+FN+A G SL +AV  I QV+  +  P  ++  F G A  F +SL   
Sbjct: 840  VSHQQQLPAVTLAFNVAPGYSLSDAVAAIHQVEAQLNFPPQIRGEFVGKAAEFASSLGDE 899

Query: 859  LLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGALLALLISGNDLGMIAIIGIIL 918
            +LL+LAA++ +YIVLGVLYESYIHP+TI+STLP A VGALLAL++ G  L +  I+GI+L
Sbjct: 900  VLLLLAAIIVIYIVLGVLYESYIHPLTIISTLPPAGVGALLALILCGMSLSVDGIVGIVL 959

Query: 919  LIGIVKKNAIMMIDFALEAERNQGMSPRDAIYQAALLRFRPILMTTLAALFGAVPLMLAT 978
            LIGIVKKNAIMMIDFA+EA R  G+  RDAI +A LLRFRPI+MTT AA+ GA+PL L  
Sbjct: 960  LIGIVKKNAIMMIDFAIEARRT-GLDARDAIRRACLLRFRPIMMTTAAAMLGALPLALGN 1018

Query: 979  GSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLYFDRLA 1018
            G GAELR+PLG+ +VGGLL+SQ++TL+TTPVIYLY +R +
Sbjct: 1019 GIGAELRRPLGVSIVGGLLLSQLVTLYTTPVIYLYMERFS 1058