Pairwise Alignments

Query, 1032 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1052 a.a., Multidrug resistance protein MdtC from Xanthobacter sp. DMC5

 Score =  960 bits (2482), Expect = 0.0
 Identities = 498/1018 (48%), Positives = 706/1018 (69%), Gaps = 5/1018 (0%)

Query: 4    SRLFILRPVATTLSMLAIVLAGLIAYKLLPVSALPQVDYPTIRVMTLYPGASPQVMTSAV 63
            S L I RPV TTL ML++V+AGL AY+ LPV+ALP+VD+PTI +    PGASP+ M ++V
Sbjct: 3    SELCIRRPVMTTLIMLSLVVAGLFAYRQLPVAALPRVDFPTINISASLPGASPETMATSV 62

Query: 64   TAPLERQFGQMPGLEQMASTSSGGASVLTLRFNLDMNMDVAEQQVQAAINAASNLLPSDL 123
              P+ERQ   + G+  + S+S+ G++ +T++F+L+ ++D A   VQ+A++ A   LP ++
Sbjct: 63   ATPIERQLATIAGISSLTSSSTQGSTSITVQFDLNRSIDAAALDVQSALSVAQRQLPDEM 122

Query: 124  PAPPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKLAQISGVGMVSIAGGQRQ 183
              PP + KVNPAD PV+ LAISS T+PL  +N+  DT + Q+++Q+ GV  V I G Q+ 
Sbjct: 123  TTPPSFRKVNPADAPVILLAISSDTLPLSAVNEYADTLIGQQISQLPGVAQVQIYGSQKY 182

Query: 184  AVRIKVNVDALAANGLNLDDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEEYAN 243
            AVRI+V+  A  A  ++ DD++  + A+  N P G   GP +   +D         ++  
Sbjct: 183  AVRIRVDPAAAGARNISADDIQRAVEAAASNTPLGIVSGPKQAQTIDMGTPKADASQFRR 242

Query: 244  LILAYNNGAPLRLKDVAEIVDGAENERLAAWANENHAVLLNIQRQPGANVIEVVDRIKGL 303
            +++   +G+ +RL+++A + DG ENER+A+W N+  AV+L + RQP AN ++VVD ++  
Sbjct: 243  VVVKARDGSVVRLEEIAVVSDGVENERVASWFNDRRAVVLAVVRQPDANTVQVVDEVRNR 302

Query: 304  LPSITDNLPAGLDVSVLTDRTQTIRAAVKDVQHELLIAIVLVVMVTFVFLRRFSATLIPS 363
            LP     LP  + + VL DR+ ++R AV DVQ  L  AIVLVV+V F+FLR   AT+IPS
Sbjct: 303  LPQFRAQLPGSVGIEVLNDRSVSVRDAVADVQKTLFEAIVLVVLVIFLFLRNVRATIIPS 362

Query: 364  IAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRHIEEGETPMQA 423
            +A+PLS+I TF  M+  G+S+NN+TL+ALT+  GFVVDDAIV+LENI RH+E GE+P +A
Sbjct: 363  LALPLSIIATFAAMWGFGYSINNMTLLALTLCVGFVVDDAIVVLENIYRHVEAGESPFRA 422

Query: 424  ALKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLTLTP 483
            AL+G+R+IGFT+IS+T SL+AV IP+LFM  VVGR+FREFA+T++VAIL+S  VSLTLTP
Sbjct: 423  ALRGSREIGFTIISMTLSLVAVFIPVLFMGGVVGRVFREFAVTISVAILVSGFVSLTLTP 482

Query: 484  MMCARLLKREPKEEEQGRFYRASGAWIDWLIQHYGSALQWVLKHQPLTLLVAVASLVLTV 543
            M+CAR++K     ++ G F+R +    D  +  Y  +L +VL+ +P  L+V  A++ L+V
Sbjct: 483  MLCARVMKPVDHTKKPGWFFRVTERMFDSWLNAYRVSLDFVLRRKPFMLVVTFATIGLSV 542

Query: 544  FLYMVVPKGFFPVQDTGVIQGISEAPQSTSFAAMSERQQALSKVILQDPAVQSLSSYIGV 603
            +LY+V+PKGFFP +D G I G  EA   +SFAAM ERQ+ ++ V+  DPAV  + S  G 
Sbjct: 543  YLYIVIPKGFFPQEDNGFITGTVEAATDSSFAAMVERQKQVADVVRADPAVDYIVSTAGA 602

Query: 604  DGDNATLNSGRLLINLKPH----GERDVSASEVISRLQPQVDRLVGIRLFMQPVQDLSIE 659
             G + T N+GRL I LKP     GER  SA++VI  L+ +V ++ G+ +F QPVQ++++ 
Sbjct: 603  TGSSRTTNTGRLFIALKPKGNGPGERVGSANDVIQGLRKRVAQVPGVNVFFQPVQNINVG 662

Query: 660  DRVSRTQYQFSLSSPDADLLAQWSGKLVQALQQRPELADVASDLQDKGLQVYLVIDRDMA 719
               S++QYQ++L SPD + L  ++  + Q L Q P L DV SDLQ    Q+ + +D+D A
Sbjct: 663  GVASKSQYQYTLQSPDTETLYAFAQTMEQRLAQLPGLRDVTSDLQITNPQLTIELDKDKA 722

Query: 720  SRLGISVSQITNALYDAFGQRQISTIYTQASQYRVVLQSSDAATIGPQALESIHVKATDG 779
            + LGI+  Q+ +ALY  FG RQI+T+YT  +Q+ ++ +        P  L  ++++ T G
Sbjct: 723  AALGITEQQLRDALYTQFGTRQIATLYTPTNQFAIIAEVQPIFQRDPSDLGRVYLRTTSG 782

Query: 780  GQVRLSALARIEQRQAQLAISHIGQFPAVTLSFNLAHGASLGEAVQVIEQVQKDIGMPLG 839
              V L  +A I++    L+I H  Q P+VT+SFNLA G SLG+AV+ I     +  +P  
Sbjct: 783  NVVPLETVANIKRTVGPLSIQHQQQQPSVTISFNLAPGTSLGQAVEEINAAAAEARVPDS 842

Query: 840  VQTRFQGAAEAFQASLSSTLLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGALL 899
            V   FQG A+ FQ SLS+  LLILAAVV +YIVLGVLYES+IHPITILS LPSA +GALL
Sbjct: 843  VIPGFQGTAQVFQDSLSNQPLLILAAVVVIYIVLGVLYESFIHPITILSGLPSAGIGALL 902

Query: 900  ALLISGNDLGMIAIIGIILLIGIVKKNAIMMIDFALEAERNQGMSPRDAIYQAALLRFRP 959
             L+ +G +L +IAIIGII+L+GIVKKNAIMMID ALE  R  G + +DAI +AALLRFRP
Sbjct: 903  TLMAAGMELSVIAIIGIIMLVGIVKKNAIMMIDVALE-RRRAGAAAQDAIREAALLRFRP 961

Query: 960  ILMTTLAALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLYFDRL 1017
            I+MTTLAA+FG +P+ +  G+G+ELRQPLG+ +VGGLLVSQ+LTLF TPV+YLY DRL
Sbjct: 962  IMMTTLAAIFGVLPIAIGAGAGSELRQPLGVAVVGGLLVSQLLTLFITPVVYLYLDRL 1019