Pairwise Alignments

Query, 1032 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1020 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  537 bits (1384), Expect = e-156
 Identities = 327/1022 (31%), Positives = 549/1022 (53%), Gaps = 11/1022 (1%)

Query: 3    LSRLFILRPVATTLSMLAIVLAGLIAYKLLPVSALPQVDYPTIRVMTLYPGASPQVMTSA 62
            LS + I RPV   +  L I+L G+I    L V   P VD P I V T Y GA+  V+ + 
Sbjct: 4    LSTVSIRRPVLAIVFSLTILLFGIIGMTFLGVREYPSVDPPIINVRTTYVGANADVIEAQ 63

Query: 63   VTAPLERQFGQMPGLEQMASTSSGGASVLTLRFNLDMNMDVAEQQVQAAINAASNLLPSD 122
            +T PLE     + G++ + STS+ G S +T+ F++  +M+ A   V+  ++ A   LP D
Sbjct: 64   ITEPLEESINGISGIKSLTSTSNDGTSNITVEFDVGADMEAAANDVRDKVSRAQRNLPPD 123

Query: 123  LPAPPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKLAQISGVGMVSIAGGQR 182
               PPV +K +    P++ L + S+   L +L+D+ D    ++L  I GV  V I G + 
Sbjct: 124  AE-PPVVSKADADSEPIVFLNVKSEQKSLLQLSDIADNIFKERLQTIPGVSEVRIWGEKE 182

Query: 183  QAVRIKVNVDALAANGLNLDDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEEYA 242
             A+R++++   +A+ G+   DV T + + NV  P G  +G T    +    +L +P+E+ 
Sbjct: 183  YAMRLRMDPIRMASYGVTPLDVLTKVQSENVELPSGRIEGSTIELSVRTKSRLSTPDEFN 242

Query: 243  NLILAYNNGAPLRLKDVAEIVDGAENERLAAWANENHAVLLNIQRQPGANVIEVVDRIKG 302
            NLI+  +    +R +DV        NER     +    V + +   PG+N I++VD    
Sbjct: 243  NLIIKESENNIVRFQDVGNAELAPLNERTVLKRDGVPMVGVVLVPLPGSNSIDIVDEFYR 302

Query: 303  LLPSITDNLPAGLDVSVLTDRTQTIRAAVKDVQHELLIAIVLVVMVTFVFLRRFSATLIP 362
             L  I  +LP  +++ +  D T+ IR ++ +VQ  +L+A +LVV + F+FLR +  T IP
Sbjct: 303  RLEFIKKDLPEDIELGIGFDSTEYIRNSISEVQETILLAFLLVVAIIFLFLRDWRTTFIP 362

Query: 363  SIAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRHIEEGETPMQ 422
             I +P+SL+G F +MY   FS+N LTL+ + ++ G VVDDAIV+LENI   IE+GE P  
Sbjct: 363  VITIPISLVGVFFIMYTMDFSINVLTLLGIVLSIGLVVDDAIVVLENIYSKIEKGEQPEA 422

Query: 423  AALKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLTLT 482
            AA KGA +I F +I+ T +L AV +P++F+    GRLFREF + +A +++IS  V+LT+T
Sbjct: 423  AAEKGAEEIFFAVIATTIALAAVFLPVIFLTGTTGRLFREFGVVVAGSVIISSFVALTMT 482

Query: 483  PMMCARLLKREPKEEEQGRFYRASGAWIDWLIQHYGSALQWVLKHQPLTLLVAVASLVLT 542
            PM+ ++LLK   K E+   FY  +     WL + Y +AL W ++ + ++ ++ +A     
Sbjct: 483  PMLSSKLLK---KREKHNWFYNVTEPGFLWLNKKYEAALVWFMQFRWVSFIIILAMGGGI 539

Query: 543  VFLYMVVPKGFFPVQDTGVIQGISEAPQSTSFAAMSERQQALSKVILQDPAVQSLSSYIG 602
              L+  +P    P +D G ++     P+  +F  M      L   ++         S+I 
Sbjct: 540  YLLFNTIPSELAPTEDRGEMRINMSGPEGATFEYMDRVIDELLYEMMTTIPSDVWDSFIS 599

Query: 603  VDG---DNATLNSGRLLINLKPHGERDVSASEVISRLQPQVDRLVGIRLFMQPVQDLSIE 659
            V       A+ NSG + + L    +R VS   V   +   + +   ++ F    Q  SI 
Sbjct: 600  VTSPGFGTASTNSGFIRVRLVDASQRTVSQQAVFEDVAEILRKKTDVKAFAS--QPQSIG 657

Query: 660  DRVSRTQYQFSLSSPDADLLAQWSGKLVQALQQRPELADVASDLQDKGLQVYLVIDRDMA 719
            DR      Q+ L + + + L +     +  + Q P       +L+    ++ + IDR+ A
Sbjct: 658  DRRGGMPIQYVLQAQNLEKLKEVIPAFMDEVTQSPIFQFSDINLKFTKPEIEVEIDREKA 717

Query: 720  SRLGISVSQITNALYDAFGQRQISTIYTQASQYRVVLQSSDAATIGPQALESIHVKATDG 779
              +G+SV +I   L  ++  ++         QY+VV +        P  L  ++V+A +G
Sbjct: 718  RNIGVSVQEIARTLQLSYSGQRFDYFIMNGKQYQVVGEMQKEDRNEPINLRMLYVRAENG 777

Query: 780  GQVRLSALARIEQRQAQLAISHIGQFPAVTLSFNLAHGASLGEAVQVIEQVQKDIGMPLG 839
              V+L  L  I ++     +    +F + T+S  LA   ++G+ +  ++++  ++ +   
Sbjct: 778  QLVQLDNLVNITEKSTPPQLYRFNRFVSATVSAGLAPKYTIGDGLDEMDRIAAEV-LDES 836

Query: 840  VQTRFQGAAEAFQASLSSTLLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGALL 899
              T   G ++ F+ S +S +   L A++ +Y+VL   +ES+  P+TI+ T+P A  GALL
Sbjct: 837  FTTDVAGVSKEFRESSNSLIFAFLFALILIYLVLSAQFESFTDPLTIMITVPLALFGALL 896

Query: 900  ALLISGNDLGMIAIIGIILLIGIVKKNAIMMIDFALEAERNQGMSPRDAIYQAALLRFRP 959
            +L + G  L + + IGII+LIG+V KN I++++FA    +  G+   +AI  AA+ RFRP
Sbjct: 897  SLWLGGYTLNIFSQIGIIMLIGLVTKNGILIVEFA-NQRKAHGLEVDEAIIGAAVARFRP 955

Query: 960  ILMTTLAALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLYFDRLAR 1019
            ILMT+L+ + G +P+ LA G+GAE R P+G+ ++GGL++S +LTLF  P +Y Y    + 
Sbjct: 956  ILMTSLSTILGILPIALALGAGAESRSPMGVAVIGGLVLSTILTLFVIPGVYTYLTSKSS 1015

Query: 1020 RL 1021
            RL
Sbjct: 1016 RL 1017