Pairwise Alignments

Query, 1035 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1055 a.a., efflux RND transporter permease subunit from Rhodanobacter sp000427505 FW510-R12

 Score =  750 bits (1936), Expect = 0.0
 Identities = 432/1029 (41%), Positives = 632/1029 (61%), Gaps = 22/1029 (2%)

Query: 1    MNLSGPFIRRPVATMLLSLAIMLLGGVSFGLLPVAPLPQMDFPVIVVSANLSGASPEVMA 60
            MN+  P IRRPV T LL+L +ML G  ++ LL VA LP +DFP + V A+  GAS + MA
Sbjct: 1    MNIFAPLIRRPVGTSLLALGLMLAGLWAYLLLGVAALPSLDFPGVYVVASQPGASAQTMA 60

Query: 61   STVATPLERKLGSIAGVTTLTSSSNQGSTRVVIGFELGRDIDGAAREVQAAINATRNLLP 120
            +TV  PLER LG I GV  +  ++++G   V++ F   R  D AAR+VQAAINA    LP
Sbjct: 61   NTVLAPLERHLGRIPGVDEMYGNASEGQASVMVRFTFDRTADSAARDVQAAINAAAVDLP 120

Query: 121  SGMRSMPTYKKINPSQAPIMVLSLTSDVLQKGQLYDLADTILSQSLAQVSGVGEVQIGGS 180
            +GM S+P Y K + SQ PI+ L+LTS  L + QL+DLADT+L  ++AQ+ GV +VQ+ G 
Sbjct: 121  TGMPSLPQYFKFDTSQIPILFLTLTSTGLPQDQLFDLADTMLKPAVAQIDGVAQVQVFGG 180

Query: 181  SLPAVRIAVEPQLLNQYNLSLDEVRTAVSNANQRRPMGFVEDAERNWQVRANDQLESAKD 240
            +  AVRI ++   L    L+ ++V  A+  AN   P G + D      V A+D L++  +
Sbjct: 181  TPHAVRIELDNGALAAKGLTTNDVANALRAANVTSPQGTLSDGHTQMTVSASDSLQTPAE 240

Query: 241  YEPVVIRQQNGTILRLSDVATVTDGVENRYNSGFFNDQAAVLLVVNRQTGANIIETVDQI 300
            +  ++I  +NGT +RLSDVA V  G ++ Y + +FND  AV L ++++  AN + TV+ I
Sbjct: 241  FARLLISVRNGTPVRLSDVAKVYSGQQDEYQAAWFNDARAVGLQISKRPEANAVATVEAI 300

Query: 301  KAQLPALQSLLPASVQLNVAMDRSPVIKATLKEAEHTLLIAVVLVILVVYLFLGSLRASL 360
            +A+LP L++ LP+SV +    D +   K+ L E +  LLI++ +V+LV+ +FL  LR +L
Sbjct: 301  RARLPQLRASLPSSVTMTPVFDLTQTTKSALHEVQVALLISIAMVVLVMLVFLRRLRPTL 360

Query: 361  IPSLAVPVSLVGTFAVMYVCGFSLNNLSLMALILATGLVVDDAIVVLENISRHIENGQPP 420
            I +L+VP+SL G F VM+  G++LN LSL+AL+L  G VVDDAIVV+ENI RH+E G+PP
Sbjct: 361  IATLSVPLSLAGAFVVMWTLGYTLNTLSLVALVLCIGFVVDDAIVVIENIVRHMERGEPP 420

Query: 421  MKAAFLGAKEVGFTLLSMNVSLVAVFVSILFMGGIVRNLFQEFSITLAAAIIVSLVVSLT 480
            M+AA  G +E+GFT++S+ +SLVAVF  +LF   I+  L +EFS+TL AA+++S +VSLT
Sbjct: 421  MEAALAGVREIGFTVVSITLSLVAVFAPLLFGNNILIMLLREFSVTLTAAVVISALVSLT 480

Query: 481  LTPMLCARWLKPQQAEQT----RLQRWSDTLHQRMVAAYDHSLGWALRHKRL----TLLS 532
            LTP LCA WL   + E T    R+++  +   +R++  Y+ +L WA+ H+R+     L  
Sbjct: 481  LTPALCA-WLLSHEPEHTRQPGRIEQAVERFDRRLLHIYERALDWAMHHRRIMRWQPLTL 539

Query: 533  LLATIGINIALYVVVPKTLMPQQDTGQLMGFIRGDDGLSFTVMQPKMEIYRRALLADPAV 592
            L+ T  +  A+      T MP +DTGQL   I  D  +S   +  +     + + ADPAV
Sbjct: 540  LILTFVLGFAVAKTAGGTFMPDEDTGQLQVDISADANISPAELTARALAVAKIMQADPAV 599

Query: 593  ---QSVAGFIGGNSGT--NNAFVLVRLKP----ISERKIDAQKVIERLRKELPKVPGGRL 643
                ++ G  GG  G   NNA + V LKP      ER+   ++V+ERL K+  K+   ++
Sbjct: 600  LDQLTMLGRDGGGGGAVGNNAQMFVDLKPRGSGPGERREGIKQVVERLSKQYDKLANVKV 659

Query: 644  FLMADQDLQLGGGGRDQTSSQYLYTLQSGDLAALREWFPKVVAALRALPELTAIDAR-DG 702
             + A Q   LGGGG      QY + L S +   L+ W  ++V  LRA+ E   + +  D 
Sbjct: 660  SVSAAQ--FLGGGGSGDKGGQYEFQLVSTNGGDLQPWALRMVRQLRAMKEFRDVSSNFDQ 717

Query: 703  AGTQQVTLVVDRDQAKRLGIDMDMVTAVLNNAYSQRQISTIYDSLNQYQVVLEINPKYAW 762
             G QQ+ L +DR+ A RL + +  + + L NA+ QRQ+S IY  +NQY VVL        
Sbjct: 718  VGKQQL-LKIDREAAARLHVGVGTIDSALYNAFGQRQVSQIYSDINQYAVVLSTGAAERV 776

Query: 763  DPSTLEQVQVITADGARVPLSTIAHYENSLANDRVSHEGQFASEDIAFDVAEGYSPDQAM 822
             P +L  V+V    G  +PLS +A    +L+  R+ H  Q  +  I++++A+  + D  +
Sbjct: 777  SPESLLDVRVRNEQGRMIPLSALATIAPNLSPLRIRHHNQLEAATISYNLAKDVTQDVGV 836

Query: 823  AALERAVAKLGLPEEVIAKLGGTADAFAQTQQGQPFMILGALLLVYLVLGILYESYIHPL 882
              +E+A     LP  +     G      Q Q     ++LG++L +Y+VLGILYES  HPL
Sbjct: 837  KLVEQAAYAARLPAGMRVDFTGANQRLKQAQSNGMVLLLGSILAMYIVLGILYESLGHPL 896

Query: 883  TILSTLPSAGVGALLALYVTGGEFSLISLLGLFLLIGVVKKNAILMIDLALQLERHQGFS 942
            TILSTLP+AG GA LA+ VT  + SL++++ + +LIG+VKKNAILM+D AL  ER +G  
Sbjct: 897  TILSTLPAAGAGAFLAMLVTQTQISLMAIIAVLMLIGIVKKNAILMVDFALVAERERGLP 956

Query: 943  PEESIRRACLLRLRPILMTTLAAILGALPLLLSQAEGAEMRQPLGLTIIGGLVFSQILTL 1002
              E+IR A L+R RPI MTTL A+  ALPL +    G+EMRQPLG+ I+GGL+ SQ+LTL
Sbjct: 957  APEAIREAALVRFRPITMTTLVAMGAALPLAIGFGIGSEMRQPLGIAIVGGLLVSQLLTL 1016

Query: 1003 YTTPVVYLY 1011
             +TP +YL+
Sbjct: 1017 LSTPAIYLW 1025