Pairwise Alignments

Query, 1035 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1052 a.a., Multidrug resistance protein MdtC from Xanthobacter sp. DMC5

 Score =  835 bits (2157), Expect = 0.0
 Identities = 443/1019 (43%), Positives = 667/1019 (65%), Gaps = 17/1019 (1%)

Query: 8    IRRPVATMLLSLAIMLLGGVSFGLLPVAPLPQMDFPVIVVSANLSGASPEVMASTVATPL 67
            IRRPV T L+ L++++ G  ++  LPVA LP++DFP I +SA+L GASPE MA++VATP+
Sbjct: 7    IRRPVMTTLIMLSLVVAGLFAYRQLPVAALPRVDFPTINISASLPGASPETMATSVATPI 66

Query: 68   ERKLGSIAGVTTLTSSSNQGSTRVVIGFELGRDIDGAAREVQAAINATRNLLPSGMRSMP 127
            ER+L +IAG+++LTSSS QGST + + F+L R ID AA +VQ+A++  +  LP  M + P
Sbjct: 67   ERQLATIAGISSLTSSSTQGSTSITVQFDLNRSIDAAALDVQSALSVAQRQLPDEMTTPP 126

Query: 128  TYKKINPSQAPIMVLSLTSDVLQKGQLYDLADTILSQSLAQVSGVGEVQIGGSSLPAVRI 187
            +++K+NP+ AP+++L+++SD L    + + ADT++ Q ++Q+ GV +VQI GS   AVRI
Sbjct: 127  SFRKVNPADAPVILLAISSDTLPLSAVNEYADTLIGQQISQLPGVAQVQIYGSQKYAVRI 186

Query: 188  AVEPQLLNQYNLSLDEVRTAVSNANQRRPMGFVEDAERNWQVRANDQLESAKDYEPVVIR 247
             V+P      N+S D+++ AV  A    P+G V   ++   +        A  +  VV++
Sbjct: 187  RVDPAAAGARNISADDIQRAVEAAASNTPLGIVSGPKQAQTIDMGTPKADASQFRRVVVK 246

Query: 248  QQNGTILRLSDVATVTDGVENRYNSGFFNDQAAVLLVVNRQTGANIIETVDQIKAQLPAL 307
             ++G+++RL ++A V+DGVEN   + +FND+ AV+L V RQ  AN ++ VD+++ +LP  
Sbjct: 247  ARDGSVVRLEEIAVVSDGVENERVASWFNDRRAVVLAVVRQPDANTVQVVDEVRNRLPQF 306

Query: 308  QSLLPASVQLNVAMDRSPVIKATLKEAEHTLLIAVVLVILVVYLFLGSLRASLIPSLAVP 367
            ++ LP SV + V  DRS  ++  + + + TL  A+VLV+LV++LFL ++RA++IPSLA+P
Sbjct: 307  RAQLPGSVGIEVLNDRSVSVRDAVADVQKTLFEAIVLVVLVIFLFLRNVRATIIPSLALP 366

Query: 368  VSLVGTFAVMYVCGFSLNNLSLMALILATGLVVDDAIVVLENISRHIENGQPPMKAAFLG 427
            +S++ TFA M+  G+S+NN++L+AL L  G VVDDAIVVLENI RH+E G+ P +AA  G
Sbjct: 367  LSIIATFAAMWGFGYSINNMTLLALTLCVGFVVDDAIVVLENIYRHVEAGESPFRAALRG 426

Query: 428  AKEVGFTLLSMNVSLVAVFVSILFMGGIVRNLFQEFSITLAAAIIVSLVVSLTLTPMLCA 487
            ++E+GFT++SM +SLVAVF+ +LFMGG+V  +F+EF++T++ AI+VS  VSLTLTPMLCA
Sbjct: 427  SREIGFTIISMTLSLVAVFIPVLFMGGVVGRVFREFAVTISVAILVSGFVSLTLTPMLCA 486

Query: 488  RWLKPQQAEQTRLQRWSDTLHQRM----VAAYDHSLGWALRHKRLTLLSLLATIGINIAL 543
            R +KP   + T+   W   + +RM    + AY  SL + LR K   L+   ATIG+++ L
Sbjct: 487  RVMKP--VDHTKKPGWFFRVTERMFDSWLNAYRVSLDFVLRRKPFMLVVTFATIGLSVYL 544

Query: 544  YVVVPKTLMPQQDTGQLMGFIRGDDGLSFTVMQPKMEIYRRALLADPAVQ---SVAGFIG 600
            Y+V+PK   PQ+D G + G +      SF  M  + +     + ADPAV    S AG  G
Sbjct: 545  YIVIPKGFFPQEDNGFITGTVEAATDSSFAAMVERQKQVADVVRADPAVDYIVSTAGATG 604

Query: 601  GNSGTNNAFVLVRLKP----ISERKIDAQKVIERLRKELPKVPGGRLFLMADQDLQLGGG 656
             +  TN   + + LKP      ER   A  VI+ LRK + +VPG  +F    Q++ +GG 
Sbjct: 605  SSRTTNTGRLFIALKPKGNGPGERVGSANDVIQGLRKRVAQVPGVNVFFQPVQNINVGGV 664

Query: 657  GRDQTSSQYLYTLQSGDLAALREWFPKVVAALRALPELTAIDARDGAGTQQVTLVVDRDQ 716
                + SQY YTLQS D   L  +   +   L  LP L  + +       Q+T+ +D+D+
Sbjct: 665  A---SKSQYQYTLQSPDTETLYAFAQTMEQRLAQLPGLRDVTSDLQITNPQLTIELDKDK 721

Query: 717  AKRLGIDMDMVTAVLNNAYSQRQISTIYDSLNQYQVVLEINPKYAWDPSTLEQVQVITAD 776
            A  LGI    +   L   +  RQI+T+Y   NQ+ ++ E+ P +  DPS L +V + T  
Sbjct: 722  AAALGITEQQLRDALYTQFGTRQIATLYTPTNQFAIIAEVQPIFQRDPSDLGRVYLRTTS 781

Query: 777  GARVPLSTIAHYENSLANDRVSHEGQFASEDIAFDVAEGYSPDQAMAALERAVAKLGLPE 836
            G  VPL T+A+ + ++    + H+ Q  S  I+F++A G S  QA+  +  A A+  +P+
Sbjct: 782  GNVVPLETVANIKRTVGPLSIQHQQQQPSVTISFNLAPGTSLGQAVEEINAAAAEARVPD 841

Query: 837  EVIAKLGGTADAFAQTQQGQPFMILGALLLVYLVLGILYESYIHPLTILSTLPSAGVGAL 896
             VI    GTA  F  +   QP +IL A++++Y+VLG+LYES+IHP+TILS LPSAG+GAL
Sbjct: 842  SVIPGFQGTAQVFQDSLSNQPLLILAAVVVIYIVLGVLYESFIHPITILSGLPSAGIGAL 901

Query: 897  LALYVTGGEFSLISLLGLFLLIGVVKKNAILMIDLALQLERHQGFSPEESIRRACLLRLR 956
            L L   G E S+I+++G+ +L+G+VKKNAI+MID+AL+  R  G + +++IR A LLR R
Sbjct: 902  LTLMAAGMELSVIAIIGIIMLVGIVKKNAIMMIDVALE-RRRAGAAAQDAIREAALLRFR 960

Query: 957  PILMTTLAAILGALPLLLSQAEGAEMRQPLGLTIIGGLVFSQILTLYTTPVVYLYLDRL 1015
            PI+MTTLAAI G LP+ +    G+E+RQPLG+ ++GGL+ SQ+LTL+ TPVVYLYLDRL
Sbjct: 961  PIMMTTLAAIFGVLPIAIGAGAGSELRQPLGVAVVGGLLVSQLLTLFITPVVYLYLDRL 1019