Pairwise Alignments

Query, 1035 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1032 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

 Score =  912 bits (2357), Expect = 0.0
 Identities = 486/1024 (47%), Positives = 684/1024 (66%), Gaps = 10/1024 (0%)

Query: 1    MNLSGPFIRRPVATMLLSLAIMLLGGVSFGLLPVAPLPQMDFPVIVVSANLSGASPEVMA 60
            MNLS  FI RPVAT L  LAI+L G +++ LLPV+ LPQ+D+P I V     GASP+VM 
Sbjct: 1    MNLSRLFILRPVATTLSMLAIVLAGLIAYKLLPVSALPQVDYPTIRVMTLYPGASPQVMT 60

Query: 61   STVATPLERKLGSIAGVTTLTSSSNQGSTRVVIGFELGRDIDGAAREVQAAINATRNLLP 120
            S V  PLER+ G + G+  + S+S+ G++ + + F L  ++D A ++VQAAINA  NLLP
Sbjct: 61   SAVTAPLERQFGQMPGLEQMASTSSGGASVLTLRFNLDMNMDVAEQQVQAAINAASNLLP 120

Query: 121  SGMRSMPTYKKINPSQAPIMVLSLTSDVLQKGQLYDLADTILSQSLAQVSGVGEVQIGGS 180
            S + + P Y K+NP+  P++ L+++S  +   +L DL DT ++Q LAQ+SGVG V I G 
Sbjct: 121  SDLPAPPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKLAQISGVGMVSIAGG 180

Query: 181  SLPAVRIAVEPQLLNQYNLSLDEVRTAVSNANQRRPMGFVEDAERNWQVRANDQLESAKD 240
               AVRI V    L    L+LD+VRT +  +N  +P G  +   R   + ANDQL S ++
Sbjct: 181  QRQAVRIKVNVDALAANGLNLDDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEE 240

Query: 241  YEPVVIRQQNGTILRLSDVATVTDGVENRYNSGFFNDQAAVLLVVNRQTGANIIETVDQI 300
            Y  +++   NG  LRL DVA + DG EN   + + N+  AVLL + RQ GAN+IE VD+I
Sbjct: 241  YANLILAYNNGAPLRLKDVAEIVDGAENERLAAWANENHAVLLNIQRQPGANVIEVVDRI 300

Query: 301  KAQLPALQSLLPASVQLNVAMDRSPVIKATLKEAEHTLLIAVVLVILVVYLFLGSLRASL 360
            K  LP++   LPA + ++V  DR+  I+A +K+ +H LLIA+VLV++V ++FL    A+L
Sbjct: 301  KGLLPSITDNLPAGLDVSVLTDRTQTIRAAVKDVQHELLIAIVLVVMVTFVFLRRFSATL 360

Query: 361  IPSLAVPVSLVGTFAVMYVCGFSLNNLSLMALILATGLVVDDAIVVLENISRHIENGQPP 420
            IPS+AVP+SL+GTF VMY+ GFS+NNL+LMAL +ATG VVDDAIV+LENISRHIE G+ P
Sbjct: 361  IPSIAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRHIEEGETP 420

Query: 421  MKAAFLGAKEVGFTLLSMNVSLVAVFVSILFMGGIVRNLFQEFSITLAAAIIVSLVVSLT 480
            M+AA  GA+++GFTL+S+  SL+AV + +LFM  +V  LF+EF+ITLA AI++SLVVSLT
Sbjct: 421  MQAALKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLT 480

Query: 481  LTPMLCARWLK--PQQAEQTRLQRWSDTLHQRMVAAYDHSLGWALRHKRLTLLSLLATIG 538
            LTPM+CAR LK  P++ EQ R  R S      ++  Y  +L W L+H+ LTLL  +A++ 
Sbjct: 481  LTPMMCARLLKREPKEEEQGRFYRASGAWIDWLIQHYGSALQWVLKHQPLTLLVAVASLV 540

Query: 539  INIALYVVVPKTLMPQQDTGQLMGFIRGDDGLSFTVMQPKMEIYRRALLADPAVQSVAGF 598
            + + LY+VVPK   P QDTG + G        SF  M  + +   + +L DPAVQS++ +
Sbjct: 541  LTVFLYMVVPKGFFPVQDTGVIQGISEAPQSTSFAAMSERQQALSKVILQDPAVQSLSSY 600

Query: 599  I---GGNSGTNNAFVLVRLKPISERKIDAQKVIERLRKELPKVPGGRLFLMADQDLQLGG 655
            I   G N+  N+  +L+ LKP  ER + A +VI RL+ ++ ++ G RLF+   QDL +  
Sbjct: 601  IGVDGDNATLNSGRLLINLKPHGERDVSASEVISRLQPQVDRLVGIRLFMQPVQDLSI-- 658

Query: 656  GGRDQTS-SQYLYTLQSGDLAALREWFPKVVAALRALPELTAIDARDGAGTQQVTLVVDR 714
               D+ S +QY ++L S D   L +W  K+V AL+  PEL  + +       QV LV+DR
Sbjct: 659  --EDRVSRTQYQFSLSSPDADLLAQWSGKLVQALQQRPELADVASDLQDKGLQVYLVIDR 716

Query: 715  DQAKRLGIDMDMVTAVLNNAYSQRQISTIYDSLNQYQVVLEINPKYAWDPSTLEQVQVIT 774
            D A RLGI +  +T  L +A+ QRQISTIY   +QY+VVL+ +      P  LE + V  
Sbjct: 717  DMASRLGISVSQITNALYDAFGQRQISTIYTQASQYRVVLQSSDAATIGPQALESIHVKA 776

Query: 775  ADGARVPLSTIAHYENSLANDRVSHEGQFASEDIAFDVAEGYSPDQAMAALERAVAKLGL 834
             DG +V LS +A  E   A   +SH GQF +  ++F++A G S  +A+  +E+    +G+
Sbjct: 777  TDGGQVRLSALARIEQRQAQLAISHIGQFPAVTLSFNLAHGASLGEAVQVIEQVQKDIGM 836

Query: 835  PEEVIAKLGGTADAFAQTQQGQPFMILGALLLVYLVLGILYESYIHPLTILSTLPSAGVG 894
            P  V  +  G A+AF  +      +IL A++ +Y+VLG+LYESYIHP+TILSTLPSA VG
Sbjct: 837  PLGVQTRFQGAAEAFQASLSSTLLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAVG 896

Query: 895  ALLALYVTGGEFSLISLLGLFLLIGVVKKNAILMIDLALQLERHQGFSPEESIRRACLLR 954
            ALLAL ++G +  +I+++G+ LLIG+VKKNAI+MID AL+ ER+QG SP ++I +A LLR
Sbjct: 897  ALLALLISGNDLGMIAIIGIILLIGIVKKNAIMMIDFALEAERNQGMSPRDAIYQAALLR 956

Query: 955  LRPILMTTLAAILGALPLLLSQAEGAEMRQPLGLTIIGGLVFSQILTLYTTPVVYLYLDR 1014
             RPILMTTLAA+ GA+PL+L+   GAE+RQPLGL ++GGL+ SQ+LTL+TTPV+YLY DR
Sbjct: 957  FRPILMTTLAALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLYFDR 1016

Query: 1015 LRHR 1018
            L  R
Sbjct: 1017 LARR 1020