Pairwise Alignments

Query, 1035 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1025 a.a., multidrug efflux system, subunit C (NCBI) from Escherichia coli BW25113

 Score = 1100 bits (2844), Expect = 0.0
 Identities = 563/1015 (55%), Positives = 753/1015 (74%), Gaps = 4/1015 (0%)

Query: 7    FIRRPVATMLLSLAIMLLGGVSFGLLPVAPLPQMDFPVIVVSANLSGASPEVMASTVATP 66
            FI RPVAT+LLS+AI L G + F +LPVAPLPQ+DFPVI+VSA+L GASPE MAS+VATP
Sbjct: 7    FIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIIVSASLPGASPETMASSVATP 66

Query: 67   LERKLGSIAGVTTLTSSSNQGSTRVVIGFELGRDIDGAAREVQAAINATRNLLPSGMRSM 126
            LER LG IAGV+ +TSSS+ GSTR+++ F+  RDI+GAAR+VQAAINA ++LLPSGM S 
Sbjct: 67   LERSLGRIAGVSEMTSSSSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMPSR 126

Query: 127  PTYKKINPSQAPIMVLSLTSDVLQKGQLYDLADTILSQSLAQVSGVGEVQIGGSSLPAVR 186
            PTY+K NPS APIM+L+LTSD   +G+LYD A T L+ +++Q+ GVG+V +GGSSLPAVR
Sbjct: 127  PTYRKANPSDAPIMILTLTSDTYSQGELYDFASTQLAPTISQIDGVGDVDVGGSSLPAVR 186

Query: 187  IAVEPQLLNQYNLSLDEVRTAVSNANQRRPMGFVEDAERNWQVRANDQLESAKDYEPVVI 246
            + + PQ L    +SLD+VRTAVSNAN R+P G +ED    WQ++ ND+L++A +Y+P++I
Sbjct: 187  VGLNPQALFNQGVSLDDVRTAVSNANVRKPQGALEDGTHRWQIQTNDELKTAAEYQPLII 246

Query: 247  RQQNGTILRLSDVATVTDGVENRYNSGFFNDQAAVLLVVNRQTGANIIETVDQIKAQLPA 306
               NG  +RL DVATVTD V++  N+G  N + A+LL++ +   ANII+TVD I+A+LP 
Sbjct: 247  HYNNGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPE 306

Query: 307  LQSLLPASVQLNVAMDRSPVIKATLKEAEHTLLIAVVLVILVVYLFLGSLRASLIPSLAV 366
            LQ  +PA++ L +A DRSP I+A+L+E E TL+I+V LVILVV+LFL S RA++IP+++V
Sbjct: 307  LQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSV 366

Query: 367  PVSLVGTFAVMYVCGFSLNNLSLMALILATGLVVDDAIVVLENISRHIENGQPPMKAAFL 426
            PVSL+GTFA MY+CGFSLNNLSLMAL +ATG VVDDAIVVLENI+RH+E G  P++AA  
Sbjct: 367  PVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKPLQAALQ 426

Query: 427  GAKEVGFTLLSMNVSLVAVFVSILFMGGIVRNLFQEFSITLAAAIIVSLVVSLTLTPMLC 486
            G +EVGFT+LSM++SLVAVF+ +L MGG+   L +EF++TL+ AI +SL+VSLTLTPM+C
Sbjct: 427  GTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMC 486

Query: 487  ARWLKPQQAEQTRLQRWSDTLHQRMVAAYDHSLGWALRHKRLTLLSLLATIGINIALYVV 546
               LK  +  + +  R    +   +   Y  SL W L H RL  + LL TI +NI LY+ 
Sbjct: 487  GWMLKASKPREQKRLRGFGRMLVALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYIS 546

Query: 547  VPKTLMPQQDTGQLMGFIRGDDGLSFTVMQPKMEIYRRALLADPAVQSVAGFIGGNSGTN 606
            +PKT  P+QDTG LMG I+ D  +SF  M+ K++ + + +  DPAV +V GF GG S  N
Sbjct: 547  IPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGG-SRVN 605

Query: 607  NAFVLVRLKPISERKIDAQKVIERLRKELPKVPGGRLFLMADQDLQLGGGGRDQTSSQYL 666
            +  + + LKP  ER   AQ++I+RLR +L K PG  LFLMA QD+++GG    Q+++ Y 
Sbjct: 606  SGMMFITLKPRDERSETAQQIIDRLRVKLAKEPGANLFLMAVQDIRVGG---RQSNASYQ 662

Query: 667  YTLQSGDLAALREWFPKVVAALRALPELTAIDARDGAGTQQVTLVVDRDQAKRLGIDMDM 726
            YTL S DLAALREW PK+   L  LPEL  +++       ++ LV DRD   RLGID+  
Sbjct: 663  YTLLSDDLAALREWEPKIRKKLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDVQA 722

Query: 727  VTAVLNNAYSQRQISTIYDSLNQYQVVLEINPKYAWDPSTLEQVQVITADGARVPLSTIA 786
              ++LNNA+ QRQISTIY  +NQY+VV+E++P+Y  D S LE++ VI  +G  +PLS  A
Sbjct: 723  ANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFA 782

Query: 787  HYENSLANDRVSHEGQFASEDIAFDVAEGYSPDQAMAALERAVAKLGLPEEVIAKLGGTA 846
             ++ + A   V+H+G  A+  I+F++  G S   A AA++RA+ +LG+P  V     GTA
Sbjct: 783  KWQPANAPLSVNHQGLSAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAGTA 842

Query: 847  DAFAQTQQGQPFMILGALLLVYLVLGILYESYIHPLTILSTLPSAGVGALLALYVTGGEF 906
              F +T   Q  +I+ A+  VY+VLGILYESY+HPLTILSTLPSAGVGALLAL +    F
Sbjct: 843  QVFQETMNSQVILIIAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPF 902

Query: 907  SLISLLGLFLLIGVVKKNAILMIDLALQLERHQGFSPEESIRRACLLRLRPILMTTLAAI 966
            SLI+L+G+ LLIG+VKKNAI+M+D AL+ +RH   +P+E+I +ACLLR RPI+MTTLAA+
Sbjct: 903  SLIALIGIMLLIGIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLAAL 962

Query: 967  LGALPLLLSQAEGAEMRQPLGLTIIGGLVFSQILTLYTTPVVYLYLDRLRHRFNR 1021
             GALPL+LS  +G+E+RQPLG+TI+GGLV SQ+LTLYTTPVVYL+ DRLR RF+R
Sbjct: 963  FGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSR 1017