Pairwise Alignments

Query, 1035 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1040 a.a., multidrug efflux system, subunit B (NCBI) from Escherichia coli BW25113

 Score =  870 bits (2247), Expect = 0.0
 Identities = 470/1014 (46%), Positives = 666/1014 (65%), Gaps = 9/1014 (0%)

Query: 7    FIRRPVATMLLSLAIMLLGGVSFGLLPVAPLPQMDFPVIVVSANLSGASPEVMASTVATP 66
            FI RPVAT LL +AI+L G + +  LPV+ LP++D+P I V     GASP+VM S V  P
Sbjct: 16   FIMRPVATTLLMVAILLAGIIGYRALPVSALPEVDYPTIQVVTLYPGASPDVMTSAVTAP 75

Query: 67   LERKLGSIAGVTTLTSSSNQGSTRVVIGFELGRDIDGAAREVQAAINATRNLLPSGMRSM 126
            LER+ G ++G+  ++S S+ G++ + + F+L   +D A +EVQAAINA  NLLPS + + 
Sbjct: 76   LERQFGQMSGLKQMSSQSSGGASVITLQFQLTLPLDVAEQEVQAAINAATNLLPSDLPNP 135

Query: 127  PTYKKINPSQAPIMVLSLTSDVLQKGQLYDLADTILSQSLAQVSGVGEVQIGGSSLPAVR 186
            P Y K+NP+  PIM L++TS  +   Q+ D+ +T ++Q ++Q+SGVG V + G   PAVR
Sbjct: 136  PVYSKVNPADPPIMTLAVTSTAMPMTQVEDMVETRVAQKISQISGVGLVTLSGGQRPAVR 195

Query: 187  IAVEPQLLNQYNLSLDEVRTAVSNANQRRPMGFVEDAERNWQVRANDQLESAKDYEPVVI 246
            + +  Q +    L+ + VRTA++ AN     G ++   R   + ANDQ++SA++Y  ++I
Sbjct: 196  VKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGPSRAVTLSANDQMQSAEEYRQLII 255

Query: 247  RQQNGTILRLSDVATVTDGVENRYNSGFFNDQAAVLLVVNRQTGANIIETVDQIKAQLPA 306
              QNG  +RL DVATV  G EN +   + N + A+++ V RQ GANII T D I+  LP 
Sbjct: 256  AYQNGAPIRLGDVATVEQGAENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQ 315

Query: 307  LQSLLPASVQLNVAMDRSPVIKATLKEAEHTLLIAVVLVILVVYLFLGSLRASLIPSLAV 366
            L   LP SV++ V  DR+  I+A++ + +  L++A+ LV++++YLFL ++ A++IP +AV
Sbjct: 316  LTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAV 375

Query: 367  PVSLVGTFAVMYVCGFSLNNLSLMALILATGLVVDDAIVVLENISRHIENGQPPMKAAFL 426
            P+SL+GTFAVM    FS+NNL+LMAL +ATG VVDDAIVV+ENISR+IE G+ P+ AA  
Sbjct: 376  PLSLIGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALK 435

Query: 427  GAKEVGFTLLSMNVSLVAVFVSILFMGGIVRNLFQEFSITLAAAIIVSLVVSLTLTPMLC 486
            GA E+GFT++S+  SL+AV + +LFMG IV  LF+EF+ITLA AI++S VVSLTLTPM+C
Sbjct: 436  GAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAITLAVAILISAVVSLTLTPMMC 495

Query: 487  ARWLKPQQ-AEQTRLQRWSDTLHQRMVAAYDHSLGWALRHKRLTLLSLLATIGINIALYV 545
            AR L  +   +Q R  R S+ +  R++AAY   L   L H  LTL   L+T+ +++ L+V
Sbjct: 496  ARMLSQESLRKQNRFSRASEKMFDRIIAAYGRGLAKVLNHPWLTLSVALSTLLLSVLLWV 555

Query: 546  VVPKTLMPQQDTGQLMGFIRGDDGLSFTVMQPKMEIYRRALLADPAVQSVAGFI---GGN 602
             +PK   P QD G + G ++     SF  M  +       +L DPAVQS+  F+   G N
Sbjct: 556  FIPKGFFPVQDNGIIQGTLQAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGVDGTN 615

Query: 603  SGTNNAFVLVRLKPISERKIDAQKVIERLRKELPKVPGGRLFLMADQDLQLGGGGRDQTS 662
               N+A + + LKP+ ER    QKVI RL+  + KVPG  LFL   QDL +       + 
Sbjct: 616  PSLNSARLQINLKPLDERDDRVQKVIARLQTAVDKVPGVDLFLQPTQDLTI---DTQVSR 672

Query: 663  SQYLYTLQSGDLAALREWFPKVVAALRALPELTAIDARDGAGTQQVTLV-VDRDQAKRLG 721
            +QY +TLQ+  L AL  W P+++  L+ LP+L+ + + D      V  V VDRD A RLG
Sbjct: 673  TQYQFTLQATSLDALSTWVPQLMEKLQQLPQLSDVSS-DWQDKGLVAYVNVDRDSASRLG 731

Query: 722  IDMDMVTAVLNNAYSQRQISTIYDSLNQYQVVLEINPKYAWDPSTLEQVQVITADGARVP 781
            I M  V   L NA+ QR ISTIY   NQY+VVLE N +     + L+ +++ ++DG  VP
Sbjct: 732  ISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTIRLTSSDGGVVP 791

Query: 782  LSTIAHYENSLANDRVSHEGQFASEDIAFDVAEGYSPDQAMAALERAVAKLGLPEEVIAK 841
            LS+IA  E   A   ++H  QF    I+F+V + YS   A+ A+      L LP ++  +
Sbjct: 792  LSSIAKIEQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVQAIMDTEKTLNLPVDITTQ 851

Query: 842  LGGTADAFAQTQQGQPFMILGALLLVYLVLGILYESYIHPLTILSTLPSAGVGALLALYV 901
              G+  AF        ++I+ A++ +Y+VLGILYES+IHP+TILSTLP+AGVGALLAL +
Sbjct: 852  FQGSTLAFQSALGSTVWLIVAAVVAMYIVLGILYESFIHPITILSTLPTAGVGALLALLI 911

Query: 902  TGGEFSLISLLGLFLLIGVVKKNAILMIDLALQLERHQGFSPEESIRRACLLRLRPILMT 961
             G E  +I+++G+ LLIG+VKKNAI+MID AL  ER QG SP E+I +ACLLR RPILMT
Sbjct: 912  AGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPREAIYQACLLRFRPILMT 971

Query: 962  TLAAILGALPLLLSQAEGAEMRQPLGLTIIGGLVFSQILTLYTTPVVYLYLDRL 1015
            TLAA+LGALPL+LS   GAE+R+PLG+ ++GGL+ SQ+LTL+TTPV+YL  DRL
Sbjct: 972  TLAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPVIYLLFDRL 1025