Pairwise Alignments

Query, 1035 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1020 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  520 bits (1338), Expect = e-151
 Identities = 320/1026 (31%), Positives = 543/1026 (52%), Gaps = 17/1026 (1%)

Query: 3    LSGPFIRRPVATMLLSLAIMLLGGVSFGLLPVAPLPQMDFPVIVVSANLSGASPEVMAST 62
            LS   IRRPV  ++ SL I+L G +    L V   P +D P+I V     GA+ +V+ + 
Sbjct: 4    LSTVSIRRPVLAIVFSLTILLFGIIGMTFLGVREYPSVDPPIINVRTTYVGANADVIEAQ 63

Query: 63   VATPLERKLGSIAGVTTLTSSSNQGSTRVVIGFELGRDIDGAAREVQAAIN-ATRNLLPS 121
            +  PLE  +  I+G+ +LTS+SN G++ + + F++G D++ AA +V+  ++ A RNL P 
Sbjct: 64   ITEPLEESINGISGIKSLTSTSNDGTSNITVEFDVGADMEAAANDVRDKVSRAQRNLPPD 123

Query: 122  GMRSMPTYKKINPSQAPIMVLSLTSDVLQKGQLYDLADTILSQSLAQVSGVGEVQIGGSS 181
                 P   K +    PI+ L++ S+     QL D+AD I  + L  + GV EV+I G  
Sbjct: 124  A--EPPVVSKADADSEPIVFLNVKSEQKSLLQLSDIADNIFKERLQTIPGVSEVRIWGEK 181

Query: 182  LPAVRIAVEPQLLNQYNLSLDEVRTAVSNANQRRPMGFVEDAERNWQVRANDQLESAKDY 241
              A+R+ ++P  +  Y ++  +V T V + N   P G +E +     VR   +L +  ++
Sbjct: 182  EYAMRLRMDPIRMASYGVTPLDVLTKVQSENVELPSGRIEGSTIELSVRTKSRLSTPDEF 241

Query: 242  EPVVIRQQNGTILRLSDVATVTDGVENRYNSGFFNDQAAVLLVVNRQTGANIIETVDQIK 301
              ++I++    I+R  DV        N       +    V +V+    G+N I+ VD+  
Sbjct: 242  NNLIIKESENNIVRFQDVGNAELAPLNERTVLKRDGVPMVGVVLVPLPGSNSIDIVDEFY 301

Query: 302  AQLPALQSLLPASVQLNVAMDRSPVIKATLKEAEHTLLIAVVLVILVVYLFLGSLRASLI 361
             +L  ++  LP  ++L +  D +  I+ ++ E + T+L+A +LV+ +++LFL   R + I
Sbjct: 302  RRLEFIKKDLPEDIELGIGFDSTEYIRNSISEVQETILLAFLLVVAIIFLFLRDWRTTFI 361

Query: 362  PSLAVPVSLVGTFAVMYVCGFSLNNLSLMALILATGLVVDDAIVVLENISRHIENGQPPM 421
            P + +P+SLVG F +MY   FS+N L+L+ ++L+ GLVVDDAIVVLENI   IE G+ P 
Sbjct: 362  PVITIPISLVGVFFIMYTMDFSINVLTLLGIVLSIGLVVDDAIVVLENIYSKIEKGEQPE 421

Query: 422  KAAFLGAKEVGFTLLSMNVSLVAVFVSILFMGGIVRNLFQEFSITLAAAIIVSLVVSLTL 481
             AA  GA+E+ F +++  ++L AVF+ ++F+ G    LF+EF + +A ++I+S  V+LT+
Sbjct: 422  AAAEKGAEEIFFAVIATTIALAAVFLPVIFLTGTTGRLFREFGVVVAGSVIISSFVALTM 481

Query: 482  TPMLCARWLKPQQAEQTRLQRWSDTLHQRMVAAYDHSLGWALRHKRLTLLSLLATIGINI 541
            TPML ++ LK ++ +       ++     +   Y+ +L W ++ + ++ + +LA  G   
Sbjct: 482  TPMLSSKLLKKRE-KHNWFYNVTEPGFLWLNKKYEAALVWFMQFRWVSFIIILAMGGGIY 540

Query: 542  ALYVVVPKTLMPQQDTGQLMGFIRGDDGLSFTVMQPKMEIYRRALLADPAVQSVAGFIG- 600
             L+  +P  L P +D G++   + G +G +F  M   ++     ++          FI  
Sbjct: 541  LLFNTIPSELAPTEDRGEMRINMSGPEGATFEYMDRVIDELLYEMMTTIPSDVWDSFISV 600

Query: 601  -----GNSGTNNAFVLVRLKPISERKIDAQKVIERLRKELPKVPGGRLFLMADQDLQLGG 655
                 G + TN+ F+ VRL   S+R +  Q V E + + L K    + F    Q +    
Sbjct: 601  TSPGFGTASTNSGFIRVRLVDASQRTVSQQAVFEDVAEILRKKTDVKAFASQPQSIGDRR 660

Query: 656  GGRDQTSSQYLYTLQSGDLAALREWFPKVVAALRALPELTAIDARDGAGTQQVTLVVDRD 715
            GG         Y LQ+ +L  L+E  P  +  +   P     D        ++ + +DR+
Sbjct: 661  GG-----MPIQYVLQAQNLEKLKEVIPAFMDEVTQSPIFQFSDINLKFTKPEIEVEIDRE 715

Query: 716  QAKRLGIDMDMVTAVLNNAYSQRQISTIYDSLNQYQVVLEINPKYAWDPSTLEQVQVITA 775
            +A+ +G+ +  +   L  +YS ++      +  QYQVV E+  +   +P  L  + V   
Sbjct: 716  KARNIGVSVQEIARTLQLSYSGQRFDYFIMNGKQYQVVGEMQKEDRNEPINLRMLYVRAE 775

Query: 776  DGARVPLSTIAHYENSLANDRVSHEGQFASEDIAFDVAEGYSPDQAMAALERAVAKLGLP 835
            +G  V L  + +        ++    +F S  ++  +A  Y+    +  ++R  A++ L 
Sbjct: 776  NGQLVQLDNLVNITEKSTPPQLYRFNRFVSATVSAGLAPKYTIGDGLDEMDRIAAEV-LD 834

Query: 836  EEVIAKLGGTADAFAQTQQGQPFMILGALLLVYLVLGILYESYIHPLTILSTLPSAGVGA 895
            E     + G +  F ++     F  L AL+L+YLVL   +ES+  PLTI+ T+P A  GA
Sbjct: 835  ESFTTDVAGVSKEFRESSNSLIFAFLFALILIYLVLSAQFESFTDPLTIMITVPLALFGA 894

Query: 896  LLALYVTGGEFSLISLLGLFLLIGVVKKNAILMIDLALQLERHQGFSPEESIRRACLLRL 955
            LL+L++ G   ++ S +G+ +LIG+V KN IL+++ A Q + H G   +E+I  A + R 
Sbjct: 895  LLSLWLGGYTLNIFSQIGIIMLIGLVTKNGILIVEFANQRKAH-GLEVDEAIIGAAVARF 953

Query: 956  RPILMTTLAAILGALPLLLSQAEGAEMRQPLGLTIIGGLVFSQILTLYTTPVVYLYLDRL 1015
            RPILMT+L+ ILG LP+ L+   GAE R P+G+ +IGGLV S ILTL+  P VY YL   
Sbjct: 954  RPILMTSLSTILGILPIALALGAGAESRSPMGVAVIGGLVLSTILTLFVIPGVYTYLTSK 1013

Query: 1016 RHRFNR 1021
              R  R
Sbjct: 1014 SSRLAR 1019