Pairwise Alignments

Query, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

Subject, 515 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  687 bits (1772), Expect = 0.0
 Identities = 347/464 (74%), Positives = 410/464 (88%), Gaps = 1/464 (0%)

Query: 32  LLSACTLSPDYHRPELNSTAAQFKHAEGWTQASPSDAIARGAWWEIYGDAGLNALVEELN 91
           LLSAC + PDY RPE+   A QFK A+GW QA+PSD++ARGAWWE+YGD  LN LV  LN
Sbjct: 52  LLSACAIGPDYQRPEVVEPA-QFKEAQGWRQATPSDSLARGAWWELYGDRQLNDLVMRLN 110

Query: 92  RSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSKNRSAQGTGSSSSSLSNNSSGIRN 151
            +NQTVAQ+EA++RQAQAL RSSR A +P++DLS  K R++QGTGSS++SLS++SSGIR+
Sbjct: 111 TANQTVAQAEARFRQAQALARSSRGAFYPTVDLSVGKTRASQGTGSSNASLSSSSSGIRD 170

Query: 152 TYNAQLGVSWEIDLWGKLRETLNANEASAEASFADLASIRLSQQSELVQNYLQLRVIDEQ 211
           T NAQLGVSWE D+WGKLR  L ANEASAEAS ADLA++RLSQQSELVQ+YLQLRV+DEQ
Sbjct: 171 TLNAQLGVSWEADIWGKLRRGLEANEASAEASSADLAAMRLSQQSELVQSYLQLRVMDEQ 230

Query: 212 KRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKSTQADLIDLIWQRAQFENAI 271
            RLL+AT+  Y+RSL+M ENQYRAGV+G DAVAQA+TQLK+TQA LIDLIWQRAQ ENAI
Sbjct: 231 TRLLQATLETYQRSLQMTENQYRAGVSGKDAVAQAQTQLKTTQASLIDLIWQRAQLENAI 290

Query: 272 AVLLGKAPADFALADSKAIPALPQIPVSLPSQLLERRPDIAAAERNVMAANANIGVSRAA 331
           AVL+G+APA+F LA SK IPALPQIPVSLPSQLLERRPDIA+AER+V+AANANIGV++AA
Sbjct: 291 AVLIGEAPANFNLAVSKDIPALPQIPVSLPSQLLERRPDIASAERSVIAANANIGVAKAA 350

Query: 332 YFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALTLFDAGKRSAEVDRTVAVYDQTV 391
           Y+PDLSLS++GGYSSS++++WI LPNR+WSVGP+LA+TLFD G+RSAEVDRTVA YD+TV
Sbjct: 351 YYPDLSLSLAGGYSSSTYADWISLPNRFWSVGPKLAMTLFDGGQRSAEVDRTVASYDETV 410

Query: 392 AQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEALDAARESLRLTENQYRAGLIGYLDVV 451
           A+YRQTVLDGFREVEN +VQLKV  DEAVV  EAL+AARESLRLT+NQY+AGLI YLDVV
Sbjct: 411 AKYRQTVLDGFREVENYMVQLKVLEDEAVVSNEALEAARESLRLTQNQYKAGLIAYLDVV 470

Query: 452 NVQTTALSNERSVLNLLQGRLVASVQLVAALGGGWDAEQAFAEQ 495
            VQ TALSNER+VL LLQ RLVASVQL+AALGGGWD +   A++
Sbjct: 471 TVQATALSNERTVLTLLQTRLVASVQLIAALGGGWDGQTPIADK 514