Pairwise Alignments

Query, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

Subject, 485 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score =  222 bits (565), Expect = 3e-62
 Identities = 150/475 (31%), Positives = 244/475 (51%), Gaps = 15/475 (3%)

Query: 23  LLGAGLCVALLSACTLSPDYHRPELNSTAAQFKHAEGWTQA-SPSDAIARGAWWEIYGDA 81
           LL   +   +LS C+L PDY RPE    AAQF     ++ A +PS A A   W + + D 
Sbjct: 5   LLSLAVTAFVLSGCSLIPDYQRPEA-PVAAQFPQGPAYSSAQAPSQAAAEQGWKQFFHDP 63

Query: 82  GLNALVEELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSKNRSAQGTGSSSSS 141
            L  L++    +N+ +  +        A  +  RA LFP++  + S +RS      S + 
Sbjct: 64  ALQQLIQTALVNNRDLRVAALNIDAYAAQYQIQRADLFPAVSATGSGSRSRTPARLSQTG 123

Query: 142 LSNNSSGIRNTYNAQLGVS-WEIDLWGKLR----ETLNANEASAEASFADLASIRLSQQS 196
            S  SS     Y+A LG+S +E+DL+G++R    E L    A+ EA      S ++S  +
Sbjct: 124 ESTISS----QYSAGLGISSYELDLFGRVRSLSEEALQKYFATEEAR----RSTQISLVA 175

Query: 197 ELVQNYLQLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKSTQAD 256
            +   YL  +   E  +L + T+ AYE+S ++       GVA    ++Q+RT +++ +  
Sbjct: 176 SVANAYLTWQADKELLKLTQDTLDAYEQSFKLTSRSNEVGVASALDLSQSRTSVENARVA 235

Query: 257 LIDLIWQRAQFENAIAVLLGKAPADFALADSKAIPALPQIPVSLPSQLLERRPDIAAAER 316
           L     Q AQ EN++ +LLG        +   +   L ++P  LPS LL+RRPDI  AE 
Sbjct: 236 LARYTRQVAQDENSLTLLLGTGLPANITSKPLSDDLLSEVPAGLPSDLLQRRPDIVQAEY 295

Query: 317 NVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALTLFDAGKR 376
           N+ AANANIG +RAA+FP ++L+ S G +S +     +  +  WS  PQ+ + +F+AG  
Sbjct: 296 NLKAANANIGAARAAFFPSITLTASAGTASPNLGGLFKGGSGTWSFAPQINIPIFNAGSL 355

Query: 377 SAEVDRTVAVYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEALDAARESLRLT 436
            A +D +    +  VA Y + +  GF+EV + L   + Y  +   ++  + A ++  RL 
Sbjct: 356 RASLDYSKIQKEINVANYEKAIQTGFQEVSDGLAARETYKQQLDAQRGFVAANQDYYRLA 415

Query: 437 ENQYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVAALGGGWDAEQA 491
           E +YR G+   L  ++ Q    S ++S++     +L + V L  ALGGGW+ + A
Sbjct: 416 ERRYRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGGGWNEQTA 470