Pairwise Alignments

Query, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

Subject, 494 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  209 bits (532), Expect = 2e-58
 Identities = 152/481 (31%), Positives = 252/481 (52%), Gaps = 27/481 (5%)

Query: 24  LGAGLCVALLSACT-LSPDYHRPELNSTAAQFKHAEGWTQASPSDAIARGAWWEIY-GDA 81
           L A L  ALL+ C  L+P Y RP+     +Q+    G   A    A++    W+ +  D 
Sbjct: 11  LSALLAAALLAGCANLAPVYSRPDA-PVPSQWPATSG---AKTEGAVSATTGWQGFITDD 66

Query: 82  GLNALVEELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSKNRSAQGTGSSSSS 141
            L   +     +N+ +  +     +A+A     RA LFPS+      + +A GT   +S+
Sbjct: 67  RLRRTIALALANNRDLRVAVQNIEKARAQYGVQRAELFPSV------SATAGGTRQRTSA 120

Query: 142 LSNNS--SGIRNTYNAQLGVS-WEIDLWGKLRETLNANEASAEASFADLASIRLSQQS-- 196
            ++NS  S I + Y+A LG S +E+DL+G++R   N NEA+ ++  +  A+ R +Q S  
Sbjct: 121 ATSNSGESSIGSQYSASLGFSSYELDLFGRVR---NLNEAALQSYLSTEATRRSTQISLV 177

Query: 197 -ELVQNYLQLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKSTQA 255
            E+   +L L   +E+ +L + T+A+ +RS  +       G +   A+AQA+T ++S + 
Sbjct: 178 AEVASAWLTLAADNERLKLAQDTLASQQRSYELTGRMRELGASSALALAQAQTTVESARV 237

Query: 256 DLIDLIWQRAQFENAIAVLLGKAPADFAL-----ADSKAIPALPQIPVSLPSQLLERRPD 310
           D+     Q AQ  NA+ +L G    D  L     A      AL ++P  LPS LL++RPD
Sbjct: 238 DVAGYTAQVAQDRNALDLLAGATVPDELLPATGIAGMATASALVEVPAGLPSALLQQRPD 297

Query: 311 IAAAERNVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALTL 370
           + AAE  +  +NA+IG +RAA+FP +SL+ S G SS++ S   +  N  WS  P ++L +
Sbjct: 298 VRAAEHTLQGSNADIGAARAAFFPTISLTASAGSSSTALSGLFKGGNSTWSFAPSISLPI 357

Query: 371 FDAGKRSAEVDRTVAVYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEALDAAR 430
           F+AG   A +D   A  +  +A Y +TV   FREV + L   +  G++   +Q  ++A R
Sbjct: 358 FNAGSNRASLDAAKAQREIDLATYEKTVQTAFREVADALAVRRSLGEQLAAQQSLVEATR 417

Query: 431 ESLRLTENQYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVAALGGGWDAEQ 490
           +S  L+E  YR G   +L+V++ Q +  + +++++ L        + L   +GGG D  Q
Sbjct: 418 KSYTLSEALYRNGSYSFLEVLDAQRSLYTAQQTLIGLRLSEQSNRITLYKVMGGG-DTAQ 476

Query: 491 A 491
           A
Sbjct: 477 A 477