Pairwise Alignments

Query, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

Subject, 498 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  288 bits (737), Expect = 3e-82
 Identities = 167/469 (35%), Positives = 269/469 (57%), Gaps = 17/469 (3%)

Query: 28  LCVALLSACTLSPDYHRPELNSTAAQFKHA---------EGWTQASPSDAIARGAWWEIY 78
           +   +L+ C   P    PE+ +TA QFK            G+T+A PS++  RGAWW  +
Sbjct: 20  MAALVLAGCATVPS-GLPEIQTTA-QFKEQGKDQGATPPAGFTRAVPSESQPRGAWWLAF 77

Query: 79  GDAGLNALVEELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSKNRSAQGTGSS 138
            D  LNALVE+ +  N  +  + A+  +A+AL R++ A   P + L    NR A    ++
Sbjct: 78  NDPTLNALVEKADIHNNDIQAAAARLAEARALARTADADRLPQIGLGAGANRGAGLDKAT 137

Query: 139 SSSLSNNSSGIRNTYNAQLGVSWEIDLWGKLRETLNANEASAEASFADLASIRLSQQSEL 198
           +S+     + I  T+      S+E+DL+G+L     A    A    A L S RL+ Q++ 
Sbjct: 138 ASTRPATMTNIGATF------SYEVDLFGRLSGASKAARLDAAGREALLQSTRLAVQAQT 191

Query: 199 VQNYLQLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKSTQADLI 258
            Q YLQLR +D ++ L+   V AY  +LR+++ + +AG      VA+ +T++ ST++D +
Sbjct: 192 AQTYLQLRALDAERALVREQVEAYRDTLRLSQRREQAGDIAELDVARVQTEVSSTESDAL 251

Query: 259 DLIWQRAQFENAIAVLLGKAPADFALADSKAIPALPQIPVSLPSQLLERRPDIAAAERNV 318
            L  QRAQ E+A+AVL+G + + F L   +    LP IP  +PS +L RRPD++AA+  V
Sbjct: 252 ALDRQRAQVEHALAVLVGDSASSFGLRTDEWSTVLPNIPAGVPSTVLMRRPDVSAAQSAV 311

Query: 319 MAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALTLFDAGKRSA 378
           +AA A +GV++AA+FPD+SL+ + GY+S    +  +   R W VG  L+L +FD G+R A
Sbjct: 312 LAAQARVGVAQAAWFPDISLTGAAGYASPEIGDLFKWSARSWGVGALLSLPIFDGGRREA 371

Query: 379 EVDRTVAVYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEALDAARESLRLTEN 438
            V    A  D  +A YR   L  F+EVE+ L  +++  +++VV+ +A+ +A+ +  L++ 
Sbjct: 372 GVQGANAQLDGALASYRTQALVAFQEVEDQLAAIRILQEQSVVQAQAVTSAQRATSLSDT 431

Query: 439 QYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVAALGGGWD 487
           +YR G I  LD+++ + + L N R  L +   +  A+V LV A+GGGWD
Sbjct: 432 RYRNGYISQLDLLDARRSELRNRRQALQVKSAQYQAAVALVRAIGGGWD 480