Pairwise Alignments

Query, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

Subject, 494 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  267 bits (682), Expect = 7e-76
 Identities = 159/468 (33%), Positives = 255/468 (54%), Gaps = 8/468 (1%)

Query: 28  LCVALLSACTLSPDYHRPELNSTAAQFKHAEGWTQASPSDAIARGAWWEIYGDAGLNALV 87
           L   L++ C + PDY  P+       +K  E W  ++P+DA  +G WW  +GD  L+AL 
Sbjct: 13  LAAMLVAGCAVGPDYKTPD-TPLPVSWKLEEPWRVSAPNDAADKGPWWRRFGDPQLDALQ 71

Query: 88  EELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSKNRSAQGTGSSSSSLSN--- 144
           ++    + T+A + A+  QA+A + ++ A  +P + L T   R+++   S++  L+N   
Sbjct: 72  QQALAGSPTLAIANARLAQARATLAANAAGQYPQVGLGT---RASRLRISANRPLTNYAT 128

Query: 145 -NSSGIRNTYNAQLGVSWEIDLWGKLRETLNANEASAEASFADLASIRLSQQSELVQNYL 203
            NS+ ++N +   L  S+E+DL G+++ T+   +ASAE S ADL + RL   +++  +Y 
Sbjct: 129 PNSTTVQNDFALSLNASYEVDLAGRVQRTVEGAKASAEQSAADLQNTRLLLSADVASSYF 188

Query: 204 QLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKSTQADLIDLIWQ 263
            LR  D +  ++  ++A   R+L +   ++  G      VAQ ++ L++T   +  L  Q
Sbjct: 189 NLRSTDIELDVVTRSIALQRRALELVTARHDLGAVSGLDVAQQQSLLETTLTQVDVLRKQ 248

Query: 264 RAQFENAIAVLLGKAPADFALADSKAIPALPQIPVSLPSQLLERRPDIAAAERNVMAANA 323
           R+Q+E+A+A L G     F+L         P +P+ +PS++L+RRPD+A+AER + AANA
Sbjct: 249 RSQYEHALATLTGTPAPSFSLPVDLREIRPPAVPLGVPSEILQRRPDVASAERAMAAANA 308

Query: 324 NIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALTLFDAGKRSAEVDRT 383
            IGV+ AA++P + +S + G  S +       P+  WSVG      LFD G+  A VD  
Sbjct: 309 QIGVATAAFYPSIFISPTVGVDSRTIETLFNGPSLLWSVGVSATQVLFDGGRIRANVDFA 368

Query: 384 VAVYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEALDAARESLRLTENQYRAG 443
            A YD TV  YR+TVL   +EVE+ +  L          Q A+ AAR  L +  ++Y  G
Sbjct: 369 KAGYDVTVGNYRRTVLTAMQEVEDGITGLSALDSATAQAQAAVTAARRVLDMATSRYEGG 428

Query: 444 LIGYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVAALGGGWDAEQA 491
              YLDV+  Q + L+ ER    L   RL+ +V LV ALGG W  + A
Sbjct: 429 ASTYLDVITAQQSLLTVERQAAQLRGQRLLTAVFLVKALGGDWCGDDA 476