Pairwise Alignments

Query, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

Subject, 501 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Sphingobium sp. HT1-2

 Score =  211 bits (538), Expect = 4e-59
 Identities = 148/488 (30%), Positives = 237/488 (48%), Gaps = 21/488 (4%)

Query: 14  ALTRGRGSRLLGAGLCVAL---LSACTLSPDYHRPELNSTAAQFKHAEGWTQASPSDAIA 70
           A+  G   R++   L + L   L+ C+ +PDY +P L          + +  A+P  A  
Sbjct: 17  AIGHGVKGRVIPEALTMLLALSLTGCSFAPDYVQPSLPVP-------DSYAVATPDGASL 69

Query: 71  RGAWWE-IYGDAGLNALVEELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSKN 129
            G  WE ++ D  L  LV +   +N+ +  + A+  QA+   R   A+L+P LD   +  
Sbjct: 70  AGRDWEQVFPDPELRRLVAQALANNRDIRIAAARVAQARGAWRIEGASLYPQLDAVATGT 129

Query: 130 RSAQGTGSSSSSLSNNSSGIRNTYNAQLGVSWEIDLWGKLRETLNANEASAEASFADLAS 189
           R   G    S  +  +      +  AQL  SWEID WG+LR    A      AS     +
Sbjct: 130 R---GQAFYSLPVIGDQIVDVKSITAQLSASWEIDFWGRLRNLKEAAREQFLASEESRRA 186

Query: 190 IRLSQQSELVQNYLQLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQ 249
           +     +++   YL  R  +E+  L + ++   + +LR+   +Y  G      +AQ++  
Sbjct: 187 VATDLIAQVALGYLLEREYEERAALTQQSIITRQETLRIMRRRYEVGSGSKLDLAQSQVL 246

Query: 250 LKSTQADLIDLIWQRAQFENAIAVLLGK----APADFALADSKAIPALPQIPVSLPSQLL 305
           L      +  L   RA   NA+A+L+G+    AP    LA         Q+P  LPS+LL
Sbjct: 247 LAQADTTMHVLNLDRAVNRNALALLVGQPVEIAPGSLRLAGPGGDY---QVPAGLPSELL 303

Query: 306 ERRPDIAAAERNVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQ 365
             RPDI AAE  + AANANIG +RAA+FP++SL+ + G +S          +  WS  P 
Sbjct: 304 TNRPDIVAAEHQLRAANANIGAARAAFFPNISLTGAYGTTSPDLDGLFGGNSEVWSFSPT 363

Query: 366 LALTLFDAGKRSAEVDRTVAVYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEA 425
           + L LF+AG+    +D   A  D+ VA Y +T+   FR+V + LV+ +    +    ++ 
Sbjct: 364 IRLPLFNAGRLKGNLDVAQARRDEAVATYEKTIQSAFRDVSDALVRRRQIALQIGTTRQL 423

Query: 426 LDAARESLRLTENQYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVAALGGG 485
           +DA RE  RL + ++  G   YL+V++ Q      E++++ L +G L + V L AALGGG
Sbjct: 424 VDAQRERARLAQLRFDNGRSTYLEVLDAQRDLFDAEQALVQLRRGELSSIVSLYAALGGG 483

Query: 486 WDAEQAFA 493
           +   +  A
Sbjct: 484 FVVNRGIA 491