Pairwise Alignments

Query, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

Subject, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

 Score =  208 bits (529), Expect = 4e-58
 Identities = 146/480 (30%), Positives = 232/480 (48%), Gaps = 16/480 (3%)

Query: 23  LLGAGLCVALLSACTLSPDYHRPELNSTAAQFKHAEGWTQASPSD-AIARGAWWEIYGDA 81
           LL   +   +L  C+L PDY  PE    AAQ+     ++    +D A A   W + + D 
Sbjct: 5   LLSLAVTAFILGGCSLIPDYQTPEA-PVAAQWPQGPAYSPTQSADVAAAEQGWRQFFHDP 63

Query: 82  GLNALVEELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSKNRSAQGTGSSSSS 141
            L  L++    +N+ +  +       +A  R  RA LFP++        SA G+GS    
Sbjct: 64  ALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAV--------SATGSGSRQRV 115

Query: 142 LSNNS----SGIRNTYNAQLGVS-WEIDLWGKLRETLNANEASAEASFADLASIRLSQQS 196
            +N S    SGI + Y+A LGVS +E+DL+G++R        +  +S     S +++  +
Sbjct: 116 PANMSQTGESGITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVA 175

Query: 197 ELVQNYLQLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKSTQAD 256
            +   Y   +      +L E T+  YE S  +       GVA    V+QART ++  +  
Sbjct: 176 SVANAYYTWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVK 235

Query: 257 LIDLIWQRAQFENAIAVLLGKA-PADFALADSKAIPALPQIPVSLPSQLLERRPDIAAAE 315
                   AQ  N++ VLLG   PAD A         L ++P  LPS +L+RRPDI  AE
Sbjct: 236 YSQYQRLVAQDVNSLTVLLGTGIPADLAKPLELDADQLAEVPAGLPSDILQRRPDIQEAE 295

Query: 316 RNVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALTLFDAGK 375
             + AANANIG +RAA+FP +SL+ + G  S    +        W   PQ+ L +F+AG 
Sbjct: 296 HLLKAANANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAGS 355

Query: 376 RSAEVDRTVAVYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEALDAARESLRL 435
             A +D +    D  VA+Y +T+   F+EV + L   K + ++   +++ + A ++  RL
Sbjct: 356 LKASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRL 415

Query: 436 TENQYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVAALGGGWDAEQAFAEQ 495
            E +YR G+   L  ++ Q    S +++++     +L + V L  ALGGGW  +   A Q
Sbjct: 416 AERRYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGWYEQTGQANQ 475