Pairwise Alignments

Query, 695 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  384 bits (987), Expect = e-110
 Identities = 194/431 (45%), Positives = 280/431 (64%), Gaps = 5/431 (1%)

Query: 255  ANQELTQLALHDTLTDLPNRTLLADRIEQAIAKVAEQGGCFALMFIDLDGFKPVNDAFGH 314
            + Q + +LA +D LT LPNRTL  DR+  A+ +   Q     LMF+DLD FKP+ND+ GH
Sbjct: 833  SEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGH 892

Query: 315  HIGDLLLKAVAARLRGHLHSQDTLARIGGDEFVLLVELQEP-----NDAMDVAVKQVNLV 369
              GD +LK +A RL   +   DT+AR+GGDEF LL++ +       N A+ VA   +  +
Sbjct: 893  AAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHVAENILGSL 952

Query: 370  SRPFRVAEHDLQLSASLGIVLYPGNGQDQHELLRNADAAMYHAKSAGKNGYSFFDVSMNS 429
             RPF +   +  ++AS+GI L P +G +  +L++NAD AMYHAK  GKN + F+   MN+
Sbjct: 953  VRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQFYQAEMNA 1012

Query: 430  NARQQLQLLQDLRLALEQRQFRLHYQPKFDAQACQPIGAEALLRWEHPQQGLLLPDRFIG 489
            +A ++L+L  DLR A+EQ +F L+YQP+F     +  GAEALLRW HP +GL+ P  FI 
Sbjct: 1013 SALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIP 1072

Query: 490  LAEKTGLIIPIGEWVLTEACRQMRQWLDQGHHGWRMAVNLSAIQFCHAGLVDSVARALQQ 549
            + E+ GL++ +G+WVL EA RQ++ W        +++VN+SA QF    L   +A  L++
Sbjct: 1073 VIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTRIANILEE 1132

Query: 550  NGLPANCLTLEITETTAMHDADASLTVLQRLSDMGVDLSIDDFGTGYSSLMYLKRLPANE 609
            +GLP  CL LE+TE+  M + + +L +L  L ++G+ +++DDFGTGYSSL YLK+ P + 
Sbjct: 1133 SGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDV 1192

Query: 610  LKIDRGFVRDLEQDSDDAAIVSAIVALGQALGLRIVAEGVETDKQQDFLTRLGCDSLQGY 669
            LKIDR FV  L +   DA I  AI+A+  +L L ++AEGVET +Q +FL   GCD +QGY
Sbjct: 1193 LKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGY 1252

Query: 670  LLGQPVPAEQF 680
            L G+P+PA QF
Sbjct: 1253 LFGRPMPAHQF 1263