Pairwise Alignments

Query, 695 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 1510 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  350 bits (899), Expect = e-100
 Identities = 189/427 (44%), Positives = 260/427 (60%)

Query: 262  LALHDTLTDLPNRTLLADRIEQAIAKVAEQGGCFALMFIDLDGFKPVNDAFGHHIGDLLL 321
            LA HD LT +PNR+LL DR++ A+A+   Q    A++FIDLD FK +ND+ GH +GD LL
Sbjct: 1075 LATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKLAVLFIDLDNFKVINDSLGHDVGDQLL 1134

Query: 322  KAVAARLRGHLHSQDTLARIGGDEFVLLVELQEPNDAMDVAVKQVNLVSRPFRVAEHDLQ 381
            K    RL+  +   DTLAR+GGDEFV ++          VA + V+ +   F + +  L 
Sbjct: 1135 KQATERLKHCVRDSDTLARLGGDEFVAVLTDVSLEKVNSVAARIVDFLGASFSINDKSLF 1194

Query: 382  LSASLGIVLYPGNGQDQHELLRNADAAMYHAKSAGKNGYSFFDVSMNSNARQQLQLLQDL 441
            +SAS+GI ++P +GQD   LL++AD AMY AK  G+N Y FF   M   A Q+L L   L
Sbjct: 1195 VSASIGISVFPDDGQDSLTLLKHADTAMYRAKERGRNQYQFFADEMKVIALQRLTLETGL 1254

Query: 442  RLALEQRQFRLHYQPKFDAQACQPIGAEALLRWEHPQQGLLLPDRFIGLAEKTGLIIPIG 501
            RLALE + FR+ YQP+ D    + +GAEALLRW  P  G + P  FI +AE  GLI  IG
Sbjct: 1255 RLALETKSFRMCYQPQVDIHTGEVVGAEALLRWRDPTLGEVSPAHFIPIAESCGLIGAIG 1314

Query: 502  EWVLTEACRQMRQWLDQGHHGWRMAVNLSAIQFCHAGLVDSVARALQQNGLPANCLTLEI 561
            E V T    Q+  W ++G    R+A+N+SA Q   AG    V   L  +G+ +  + +E+
Sbjct: 1315 ETVFTMVLEQIAYWREKGLTVPRIAINVSAHQLRDAGFAAKVGSWLDSSGISSELIGIEL 1374

Query: 562  TETTAMHDADASLTVLQRLSDMGVDLSIDDFGTGYSSLMYLKRLPANELKIDRGFVRDLE 621
            TE+  M   D    +L     MG+ +SIDDFGTGYSSL YLK+LP +ELKIDR FV  + 
Sbjct: 1375 TESALMERIDMVKEMLTSFDGMGMKVSIDDFGTGYSSLSYLKKLPIHELKIDRSFVDGIA 1434

Query: 622  QDSDDAAIVSAIVALGQALGLRIVAEGVETDKQQDFLTRLGCDSLQGYLLGQPVPAEQFM 681
             + DD +I  AI+ + +ALG+R+VAEGVE+++Q   L   GCD +QGYL  +P+  E F 
Sbjct: 1435 LERDDRSIAKAIIDMSRALGMRVVAEGVESEEQLGVLKEEGCDMVQGYLFHRPLSPEAFA 1494

Query: 682  SKLQAMG 688
              ++  G
Sbjct: 1495 KVIETGG 1501