Pairwise Alignments

Query, 170 a.a., RNA polymerase, sigma 19 factor from Pseudomonas putida KT2440

Subject, 168 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score =  121 bits (304), Expect = 5e-33
 Identities = 62/152 (40%), Positives = 94/152 (61%), Gaps = 1/152 (0%)

Query: 15  LYREHRGWLEAWLRRRMGNAWDAADLSQDTFLRILASAQPLADIREPRAYLLTVGKRLLS 74
           +Y +H  WL  WL+ ++ NA DAAD++ DTF+RIL      A I EPR YL T+ + L+ 
Sbjct: 13  IYEQHHSWLHGWLKGKLHNACDAADVAHDTFVRILGGRHA-AQILEPRDYLATIARGLVI 71

Query: 75  NFHQRRSLEQAYLDALAQLPEQHVPSPEQRWVLLETLQALDELLDGLKPAIRKAFLWSQL 134
           + ++R ++EQAY   LA+ P+    S E + +++ETL A+D+ L GL    R+ F+ SQ+
Sbjct: 72  DRYRRHAIEQAYKQTLAERPDATAISEEDKAIIIETLVAVDKALAGLGERARRIFMLSQV 131

Query: 135 EGLGYAEIGQRLGVCQRSVKRYMAQAYEHCLL 166
           EGL Y +I   L V   +VK++M +A   C L
Sbjct: 132 EGLTYQQIADELQVSLTTVKKHMIRALTECSL 163