Pairwise Alignments

Query, 170 a.a., RNA polymerase, sigma 19 factor from Pseudomonas putida KT2440

Subject, 179 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score = 75.9 bits (185), Expect = 3e-19
 Identities = 50/146 (34%), Positives = 84/146 (57%), Gaps = 11/146 (7%)

Query: 26  WLRRRMGNAWDAADLSQDTFLRILASAQPLADIREPRAYLLTVGKRLLSNFHQRRSL--- 82
           +LR+R  NA DAAD++QD F + L   +  A + +PRA+L  + + LL +  +++ +   
Sbjct: 24  FLRKRTDNASDAADMTQDVFTQWL-DYRDRAKVEQPRAFLFQMARNLLRDHWRKQKVRHT 82

Query: 83  ---EQAYLDALAQLPEQHVP-SPEQRWVLLETLQALDELLDGLKPAIRKAFLWSQLEGLG 138
              +QA +DA     EQ+ P +  QR   L+ L+ L E+L  L P  R+A +  + EGL 
Sbjct: 83  VHSDQADMDAEPATDEQNDPMAAVQR---LQRLEQLKEVLAELSPRRREALMLHRFEGLS 139

Query: 139 YAEIGQRLGVCQRSVKRYMAQAYEHC 164
            A+I +R+G+    V++++A A  HC
Sbjct: 140 QAQIAERMGISTSMVEKHIAFALLHC 165