Pairwise Alignments

Query, 170 a.a., RNA polymerase, sigma 19 factor from Pseudomonas putida KT2440

Subject, 170 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score =  154 bits (390), Expect = 6e-43
 Identities = 77/153 (50%), Positives = 105/153 (68%), Gaps = 1/153 (0%)

Query: 15  LYREHRGWLEAWLRRRMGNAWDAADLSQDTFLRILASAQPLADIREPRAYLLTVGKRLLS 74
           LY  H  WL  WLRRR+G    AADL+QDT++R+L  A+    + EPRA+L TV KR+L 
Sbjct: 18  LYHAHHNWLTGWLRRRLGCPHSAADLAQDTYMRLL-QAREAPQLVEPRAFLATVAKRVLC 76

Query: 75  NFHQRRSLEQAYLDALAQLPEQHVPSPEQRWVLLETLQALDELLDGLKPAIRKAFLWSQL 134
           N  +R+ LE+AYL ALAQ+PE+  P  EQ+ ++ ETL ALD LLDGL P +++AFL +Q+
Sbjct: 77  NHFRRQELERAYLQALAQVPEEVAPCEEQKAIIFETLLALDHLLDGLPPLVKRAFLLAQV 136

Query: 135 EGLGYAEIGQRLGVCQRSVKRYMAQAYEHCLLA 167
           +GLG  EI + LG+   +VKRY+ +A   C  A
Sbjct: 137 DGLGQGEIARELGISLATVKRYLNKAAMRCYFA 169