Pairwise Alignments

Query, 170 a.a., RNA polymerase, sigma 19 factor from Pseudomonas putida KT2440

Subject, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

 Score = 66.6 bits (161), Expect = 2e-16
 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 8/151 (5%)

Query: 19  HRGWLEAWLR------RRMGNAWDAADLSQDTFLRILASAQPLADIREPRAYLLTVGKRL 72
           H+G+L+ +        R++ +   A DL+ D F+R+L +  P   + +PRAYL    + +
Sbjct: 4   HKGFLDHYHELIGTWTRKLRSRQQAEDLTHDAFVRVLET--PREQVEQPRAYLHQAARNI 61

Query: 73  LSNFHQRRSLEQAYLDALAQLPEQHVPSPEQRWVLLETLQALDELLDGLKPAIRKAFLWS 132
             +  +R    QA      +        PE     LE   +++  L  L    R+ F+W 
Sbjct: 62  AVDGFRREDRRQALEREAFEEGATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQ 121

Query: 133 QLEGLGYAEIGQRLGVCQRSVKRYMAQAYEH 163
           +LEGL  AEI +R+G+ +  V++YM +   H
Sbjct: 122 KLEGLTQAEIAERMGLSKNMVEKYMIRTLRH 152