Pairwise Alignments

Query, 391 a.a., putative Acetylornithine deacetylase from Pseudomonas putida KT2440

Subject, 393 a.a., N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) from Variovorax sp. SCN45

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 97/354 (27%), Positives = 141/354 (39%), Gaps = 37/354 (10%)

Query: 59  NLFATVGPRDVGG----VVLSGHTDVVPVDG-QAWTVEPFALSERDGRLYGRGTADMKGF 113
           NL+A   P D       +V +GHTDVVP    + WT  PF  + RDG+LYGRG  DMK  
Sbjct: 53  NLWAVRRPADAAATTRTLVFAGHTDVVPTGPVEQWTSHPFTPTHRDGKLYGRGACDMKTS 112

Query: 114 IASVLAAVPAFL--AQPLRMPVHLAFSYDEE-VGCLGVRSMLAALQQRPCKPRLCLIGEP 170
           +A+ + ++  FL      R+ + L  + DEE  G  G   +   L  R      C++GEP
Sbjct: 113 VAAFVTSIEDFLQAVPEPRLTLALLLTSDEEGPGVDGTVVVCNTLAARGEVIDYCIVGEP 172

Query: 171 TELKPV-----LGHKGKLAMRCQVQGAACHSAYAPYGVNAIEYAAKLIGKLGEIGEALAL 225
           T ++        G +G ++ +  V+G   H AY     N +   A  + +L  I  A   
Sbjct: 173 TAVERCGDMIKNGRRGTMSGKLTVKGVQGHIAYPHLAKNPVHSVAPALAELVAINAAGGW 232

Query: 226 PVHHDERFDPPFSTVQAGVIKGGRALNIVPDECEFDFEVRALPGFEAQAVADQLQTYAEA 285
               +  F P  S   +    G  A N++P     DF  R    F  ++  + LQ    A
Sbjct: 233 DAASNPYFQPT-SWQISNFHSGTGASNVIPGSAVIDFNFR----FSTESTPESLQQRVHA 287

Query: 286 ELLPRMRKVNTASAIRLAPLSAYPGLATPEDSEAARLVALLSGS---DTFGTVAFGTEGG 342
            L         A  I   P    PG           LV  + G+   +T       T GG
Sbjct: 288 VLDAHQVDYTLAWTIGGLPFLTTPG----------ELVTAVQGAIRDETGIETELSTSGG 337

Query: 343 LFDQAGI-----PTVVCGPGSMDQGHKPDEFVSVEQLRGCDAMLLRLVDYLKQA 391
             D   I       V  GP +    HK DE + V ++     + +R +  L  A
Sbjct: 338 TSDARFIAKICRQVVELGPVNASI-HKIDEHIDVAEIETLKNIYVRTLKQLDAA 390