Pairwise Alignments

Query, 422 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 448 a.a., porin from Pseudomonas simiae WCS417

 Score =  221 bits (564), Expect = 3e-62
 Identities = 151/439 (34%), Positives = 221/439 (50%), Gaps = 46/439 (10%)

Query: 17  STTALASDDLMTRST-LTGDWGGLRHQLEEDGVKITGDYSGETAYNAHGGLH--RSARYS 73
           S  A+A+D     S  +TGDWGG R +L E G+ I  DY GE  YNA GG +  ++ RYS
Sbjct: 23  SANAMAADAFSADSKWMTGDWGGERTKLIEQGIDIKADYVGEMGYNAKGGYNDDKTGRYS 82

Query: 74  QNVKLGVQFDLSKLYGLDN-GGKVQLTINDRRGNSASEDLVGN-----RLPIQENYG-GL 126
               LGV  DL KL+G DN   K+QLT  +R G + S D +G+          E YG G 
Sbjct: 83  DQFGLGVALDLQKLWGWDNTQAKIQLT--NRNGQNISNDRIGDPRAGTLSSSMEVYGRGH 140

Query: 127 YTRLTELSYERTLFTPALNVKLGYMAMGNDLGGLDSGILCNFMNAGFCGHPLNMSGGSGW 186
             RLT+   +  +F   L+VKLGY   G D         C+F N  FCG  +  +  + W
Sbjct: 141 MVRLTQFWIQHQMFDNKLDVKLGYFGEGEDFNTFP----CDFQNLSFCGSQVG-NYVNTW 195

Query: 187 TNYPNAHLGVRVKYDLSPAWQLRVAAFNVDPESNGNSSRAWHLGPKHTTGTVVPVELVYK 246
            N+P +   +RVKY+++P    ++ A+N +P S       + L    T GTV+PVELV+ 
Sbjct: 196 YNWPVSQAAIRVKYNITPELYAQIGAYNQNP-SQLEHGNGFKLSGSGTKGTVIPVELVWS 254

Query: 247 LQ-GELPGEYKLGYYYDSSDVKRIGSD----DEV---------SGRGGHYLLVDQAVWND 292
            +   LPGEY++GYY  ++D   +  D    D V         S + G++ +  Q +   
Sbjct: 255 PKVNNLPGEYRVGYYKSAADAPDVREDVNGNDAVITRADFRTRSSKKGYWFVAQQQLTTH 314

Query: 293 QASPGRSLHAFGQYSASSKAASPFTKWYGAGVVLYKPFEGRPKDTVALGYGRAVPNPRSR 352
                R L+     +   K  +    +    +V   PF+ RPKD V +G  R   N    
Sbjct: 315 NGDASRGLNIAANATFHDKETNLVDNYQSLMLVYKGPFDARPKDDVGIGVARLHVN---N 371

Query: 353 DVLEDA-AFNAGQQFPDIDSA--------EQLIELSYGYQATPWLNLRPDVQYIIEPGAF 403
           DV ++A   NA     D D+A        E  +EL+YG+  T WL +RP++QY+++PG  
Sbjct: 372 DVKKNAELLNAANGVSDYDNALYTPIRETEYNVELNYGFHVTNWLTVRPNLQYVVQPGGV 431

Query: 404 SGKDIDNALVVGLQVKATF 422
               +DNALV GL++++TF
Sbjct: 432 D--KVDNALVAGLKIQSTF 448