Pairwise Alignments

Query, 422 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 421 a.a., porin from Pseudomonas simiae WCS417

 Score =  717 bits (1852), Expect = 0.0
 Identities = 339/410 (82%), Positives = 375/410 (91%), Gaps = 4/410 (0%)

Query: 13  LALASTTALASDDLMTRSTLTGDWGGLRHQLEEDGVKITGDYSGETAYNAHGGLHRSARY 72
           LAL +   + +DD    +TLTGDWGGLRH+L+  G++ TG+YSGETAYNAHGG HRSARY
Sbjct: 16  LALGAALPVQADD----TTLTGDWGGLRHELDAQGIRFTGEYSGETAYNAHGGQHRSARY 71

Query: 73  SQNVKLGVQFDLSKLYGLDNGGKVQLTINDRRGNSASEDLVGNRLPIQENYGGLYTRLTE 132
           SQN+KLGVQFDL KLYG +NG ++Q+T+NDRRGNSASEDLVGNRLPIQENYGGLYTRLTE
Sbjct: 72  SQNLKLGVQFDLGKLYGFNNGDRIQVTLNDRRGNSASEDLVGNRLPIQENYGGLYTRLTE 131

Query: 133 LSYERTLFTPALNVKLGYMAMGNDLGGLDSGILCNFMNAGFCGHPLNMSGGSGWTNYPNA 192
           LSYERTLFTPALNVKLGYMAMGNDLGGLDSGILCNFMNAGFCGHPLNMSGGSGWTNYPNA
Sbjct: 132 LSYERTLFTPALNVKLGYMAMGNDLGGLDSGILCNFMNAGFCGHPLNMSGGSGWTNYPNA 191

Query: 193 HLGVRVKYDLSPAWQLRVAAFNVDPESNGNSSRAWHLGPKHTTGTVVPVELVYKLQGELP 252
           HLG RVKYD +P WQLRVAAFNVDP+SNGNSSRAWHLGPKHTTGTVVP+ELVYK  G LP
Sbjct: 192 HLGARVKYDFAPNWQLRVAAFNVDPQSNGNSSRAWHLGPKHTTGTVVPIELVYKHAGSLP 251

Query: 253 GEYKLGYYYDSSDVKRIGSDDEVSGRGGHYLLVDQAVWNDQASPGRSLHAFGQYSASSKA 312
           GEYKLGYYYDSSDVKRIGS+ EVSGRGGHYLL+DQAVW  ++S GR LHAFGQYSA+S+A
Sbjct: 252 GEYKLGYYYDSSDVKRIGSNKEVSGRGGHYLLIDQAVWASESSAGRVLHAFGQYSAASEA 311

Query: 313 ASPFTKWYGAGVVLYKPFEGRPKDTVALGYGRAVPNPRSRDVLEDAAFNAGQQFPDIDSA 372
           ASPF+KWYGAGVVLYKPFEGRP+DT+ALGYGRAVPNPRSR+V E AA NAG  +P++++A
Sbjct: 312 ASPFSKWYGAGVVLYKPFEGRPRDTLALGYGRAVPNPRSREVQELAALNAGNDYPNLNNA 371

Query: 373 EQLIELSYGYQATPWLNLRPDVQYIIEPGAFSGKDIDNALVVGLQVKATF 422
           EQLIELSYGYQATPWL LRPDVQYIIEPGAFSG++IDNALV+GLQ KA F
Sbjct: 372 EQLIELSYGYQATPWLTLRPDVQYIIEPGAFSGENIDNALVLGLQAKAVF 421