Pairwise Alignments

Query, 422 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 488 a.a., carbohydrate porin from Magnetospirillum magneticum AMB-1

 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 66/262 (25%), Positives = 107/262 (40%), Gaps = 29/262 (11%)

Query: 168 FMNAGFCGHPLNMSGGSGWTNYPNAHLGVRVKYDLSPA--WQLRVAAFNVDPESNGNSSR 225
           FMN+    + L  +GG    +      G+R+ Y +S A  W+++   F        + + 
Sbjct: 249 FMNSALVHNALLDAGGDVGVDPFGFSPGLRLAY-VSDADKWKVQAGVFE-------SGTG 300

Query: 226 AWHLGPKHTTGTVVPVELVYKLQGELPGEYKLGYYYDSSDVKRIGSDDEVSGRGGHYLLV 285
           A   G       +V  E   +  G L G Y++   Y  S+ +    D++     G  L +
Sbjct: 301 ASFQGSNEFPFRIVQAETTERFFGGLEGTYRV---YAWSNDRATDFDNKRGRHAGLGLSL 357

Query: 286 DQAVWNDQASPGRSLHAFGQYSASSKAASPFTKWYGAGVVLYKPFEGRPKDTVALGYGRA 345
           DQ V +D  +       FG+Y    K  + F +    G  +   + GR  D   +G    
Sbjct: 358 DQKV-DDYVT------LFGRYGYQLKGKTRFDQSASIGGEVNGSYWGRGADGFGVGLVAN 410

Query: 346 VPNPRSRDVLEDAAFNAGQQ-FPDID----SAEQLIELSYGYQATPWLNLRPDVQYIIEP 400
             +   RD  E    +A Q   PD+     S EQ  E+ Y Y+  P  +L PD+Q I  P
Sbjct: 411 HLSKTYRDKSE--TLDADQDGAPDVGYKATSFEQTAEIYYRYRVMPRFDLTPDLQIIRHP 468

Query: 401 GAFSGKDIDNALVVGLQVKATF 422
           G     ++  A  VGL+ + T+
Sbjct: 469 GGNPSGEV--AYAVGLRGQLTY 488