Pairwise Alignments

Query, 422 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 499 a.a., carbohydrate porin from Magnetospirillum magneticum AMB-1

 Score =  124 bits (312), Expect = 5e-33
 Identities = 125/433 (28%), Positives = 183/433 (42%), Gaps = 49/433 (11%)

Query: 11  LLLALASTTALASDDLMT------------RSTLTGDWGGLRHQLEEDGVKITGDYSGET 58
           ++++L S TALA   L              R T  G +GG R +L + GV++      E 
Sbjct: 45  VVVSLLSLTALAHPALADGDCEVTPPGFWERDTALGSFGGARTELCKKGVQLGVTSVNEM 104

Query: 59  AYNAHGGLHRSARYSQNVKLGVQFDLSKLYGLDNGGKVQLTINDRRGNSASEDLVGNRLP 118
             N +GG+    +    ++  +  DL K+  L  G  +        G   S   +GN +P
Sbjct: 105 LANPYGGVSHGGKGQGRMQFDLDIDLEKMAEL-KGTTLHAGAMWIYGGRISGKNLGNLMP 163

Query: 119 IQENYGGLYTRLTELSYERTLFTPALNVKLGYMAMGNDLGGLDSGILCNFMNAGFCGHPL 178
           +         RL  L  ++ LF   L+V+LG +A+ ++   + S +   F+N+ F G P 
Sbjct: 164 VSNIEAIPSRRLFTLWGQQVLFDDMLSVRLGQLAVDDEF--VVSKLSSVFVNSTF-GFPF 220

Query: 179 NMSGG--SGWTNYPNAHLGVRVKYDLSPAWQLRVAAFNVDPESNGNSSRAWHLGPKHTT- 235
            +SG   SG   +P    G RVK +L+       AAF  DP    +           TT 
Sbjct: 221 GISGNLPSGGAAFPMPTPGARVKLNLTDEVSWMTAAFAGDPAGKFDVRDPQWRNHDGTTF 280

Query: 236 ----GTVVPVELVYKLQGE-----LPGEYKLGYYYDSSDVK---------------RIGS 271
               GT    E  Y +  E     LPG YKLG +Y S+                    G 
Sbjct: 281 SFSRGTFYITEGAYAVNQEKNSKGLPGTYKLGAWYHSARFNDQHFDNLGQSLASGNTTGI 340

Query: 272 DDEVSGRGGHYLLVDQAVWNDQASPGRSLHAF--GQYSASSKAASPFTKWYGAGVVLYKP 329
            + V G GG Y ++DQ +   Q      L  F  G  S S +   PF   Y  G + YK 
Sbjct: 341 GNPVRGNGGVYFVIDQMLIKGQRWSEEGLGVFLRGGVSPSDRNQVPF---YLDGGISYKG 397

Query: 330 -FEGRPKDTVALGYGRAVPNPRSRDVLEDAAFNAGQQFPDIDSAEQLIELSYGYQATPWL 388
            F GR +DT+ALG G    +   + +  D     GQ    +   E +IE++Y  Q TPW 
Sbjct: 398 LFAGREEDTLALGVGYGQLSGSLQGLDRDTRQINGQPTRPVRDYETVIEVTYQAQITPWW 457

Query: 389 NLRPDVQYIIEPG 401
            ++PDVQY+I PG
Sbjct: 458 TIQPDVQYVIHPG 470