Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 299 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  173 bits (438), Expect = 5e-48
 Identities = 106/303 (34%), Positives = 161/303 (53%), Gaps = 10/303 (3%)

Query: 1   MDKLLAMKMFVATVDAQGFSAAARRLGLATSSVTRLVDALEASLGATLLNRSTRQVSLTE 60
           MD L ++ +FV   + + F+AA R LG+++S+V + +  +E  LG  L +RSTR ++LT 
Sbjct: 1   MDSLGSLSVFVQVAETRSFTAAGRVLGVSSSAVGKSIARMEERLGVRLFHRSTRSITLTS 60

Query: 61  AGARYYQRARGIFEALDEADASIADRGEEPVGVLRLSLPVEFGRRVIAPHLGPFLAQHPA 120
            GA + +R+R I   ++ A+  ++D    P G LR+S+P    R ++ P L  F+  +P 
Sbjct: 61  EGALFLERSRRILAEVEAAEQELSDASATPRGKLRISVPQV--RGLLMPVLSDFMRAYPD 118

Query: 121 LELDIDLSDRLDDLLDGRYDLSIRLGDPSPNDELVCRRLGGFQRWLVASPAYLAGREPLQ 180
           +ELD+D SDR+ D+++  +D  IR G P  +  L+ R LG +Q  LV +P Y       Q
Sbjct: 119 IELDVDFSDRMVDVIEEGFDAVIRTGKPE-DSRLMARHLGHYQLVLVGTPGYFREYGTPQ 177

Query: 181 HPQELLDHACLRFRY--GQKARPWRLTCGQDSLELDVSGPLRSANADMLRETALAGSGIA 238
            PQ L DHACLR ++    K  PW L     + E  + GP  S   + L      G GIA
Sbjct: 178 QPQHLSDHACLRHKFCATGKLEPWPLRRAPGAPESILRGPFVSTTIESLNHVVHEGLGIA 237

Query: 239 LLADWLVREDVLAGRLQRIFPDWQASPGAANSSINALYMPNHRGSRRVNAFID-FCENLL 297
            L D++V + V  GRLQR+  D+    G    S   L+  +   S ++  FID  C  L 
Sbjct: 238 CLPDYMVNQAVAEGRLQRVLDDYLEHRG----SFWMLWPSSRHASAKLRVFIDHMCAGLF 293

Query: 298 IHG 300
             G
Sbjct: 294 PTG 296