Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 304 a.a., Probable transcription regulator protein of MDR efflux pump cluster from Variovorax sp. SCN45

 Score =  155 bits (393), Expect = 8e-43
 Identities = 100/299 (33%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 1   MDKLLAMKMFVATVDAQGFSAAARRLGLATSSVTRLVDALEASLGATLLNRSTRQVSLTE 60
           MD++ AM++FV  V+A  F+ AA  L L   +VT+ + ALE+ L   LLNR+TR+V++T 
Sbjct: 1   MDQIQAMRIFVRVVEAGTFTRAADSLALPKGTVTKQIQALESRLRVKLLNRTTRRVTVTP 60

Query: 61  AGARYYQRARGIFEALDEADASIADRGEEPVGVLRLSLPVEFGRRVIAPHLGPFLAQHPA 120
            GA Y++RA  +    D+ +AS+ +    P G LR+ +     R VI P L  F  ++P 
Sbjct: 61  DGAAYFERAARLLNDFDDMEASMTNAQANPTGRLRIDIGTSVARLVILPALATFCDRYPD 120

Query: 121 LELDIDLSDRLDDLLDGRYDLSIRLGDPSPNDELVCRRLGGFQRWLVASPAYLAGREPLQ 180
           +++D+ +SDR  DL+    D  IR G+ S +  LV RR+G      VASPAY+      Q
Sbjct: 121 IQVDLGVSDRTVDLISDNVDCVIRAGELS-DQSLVARRIGTLHFVTVASPAYIKRYGMPQ 179

Query: 181 HPQEL-LDHACLRFRYGQKARPWRLTCGQDSLELDVSGPLR-SANADMLRETA-LAGSGI 237
           HP ++   H  + +  G   R +     +   +++++GP R S N       A L G GI
Sbjct: 180 HPNDIEKRHHVVSYFSGTTRRVYPHEFKKGDEQIELNGPYRVSVNESNAHIAAVLGGFGI 239

Query: 238 ALLADWLVREDVLAGRLQRIFPDWQASPGAANSSINALYMPNHRGSRRVNAFIDFCENL 296
           +    ++    + +G L  + PDW   P      I+ +Y PN   S +V AF+D+   L
Sbjct: 240 SQCITFMAEPLLESGELVEVLPDWSRDP----LPIHVVYPPNRHLSAKVRAFVDWAAEL 294