Pairwise Alignments

Query, 325 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 335 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 99.8 bits (247), Expect = 9e-26
 Identities = 75/258 (29%), Positives = 124/258 (48%), Gaps = 6/258 (2%)

Query: 54  VPSSSGAVLQVEAIADQLDLDLFDYLVVFGGRSAMATAALAPRYQALLRQAAKAGVKLVG 113
           V S  G V++ +A  D   L   + LV+ GG      A+    +  LLR AA+ G+ L G
Sbjct: 73  VISDLGLVIRPDARIDVAALQDLELLVICGGFRTELKAS--EDFIHLLRGAAEQGISLAG 130

Query: 114 VDNGAFLLAACGLLQGHKVVVHWRHEAEFRAAFPQLQLLREQLYCIDGNRITCAGGTAAI 173
           + NGA+ L   GLLQG++  +H  H            +  E  Y ID +R+T +  + A 
Sbjct: 131 LWNGAWFLGRAGLLQGYRCAIHPEHRPALGEVSKATHVTSEP-YVIDRDRLTASSPSGAF 189

Query: 174 DLAVALLSRACGRTRALKGLADMLVDETRDSRHALRSLELGACQGRQVQRAQALMRHHLG 233
            +A+  +    G+   ++G+ D+L  E  +SR+              ++    LM  +L 
Sbjct: 190 HMALDWIKGLHGKA-LVEGIEDILAFE--ESRYRRIKPTENVSVSAPLREVVKLMDANLE 246

Query: 234 TPLAVEQLAAELGISRRQLDRQFQASHGMSTKAWWLEMRLQQARWRLLNSSHSLAQIADE 293
            PL ++QLA   G SRRQL+R F+   G + + +++E+R+ +AR  L ++  S  ++   
Sbjct: 247 EPLELDQLAVYAGRSRRQLERLFKEQLGTTPQRYYMELRVTEARRLLQHTELSQVEVLVA 306

Query: 294 VGLGDASYLGKCVRRRFG 311
            G    S+  KC    FG
Sbjct: 307 CGFVSPSHFSKCYSSYFG 324