Pairwise Alignments

Query, 325 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 358 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  119 bits (299), Expect = 9e-32
 Identities = 90/308 (29%), Positives = 148/308 (48%), Gaps = 12/308 (3%)

Query: 7   LLIMPLPDFALLPFGAFLDKLRFSADDEDYSQQRYCSWMVAGLSLEPVPSSSGAVLQVEA 66
           ++ + L  F L+   + ++ LR +      S Q    W  A     PV +S G  +  E 
Sbjct: 9   IVFLLLDQFTLMSLASAVEPLRMA---NQLSGQELYKWHTASSDGNPVWASDGVPITPEG 65

Query: 67  IADQLDLDLFDYLVVFGGRSAMATAALAPRYQALLRQAAKAGVKLVGVDNGAFLLAACGL 126
                 +   D ++V GG     T  +       LR  A+   +L G+  G+F+LA  GL
Sbjct: 66  SI--FSVPPADIVIVCGGIGIQGT--VTGELVKWLRGQARYAKRLGGICTGSFVLARAGL 121

Query: 127 LQGHKVVVHWRHEAEFRAAFPQLQLLREQLYCIDGNRITCAGGTAAIDLAVALLSRACGR 186
           L G++  VHW   A  + AFP++ +    L+ +D +R+T +GGTA +D+ + L+ R  G 
Sbjct: 122 LDGYECSVHWEWLAAMQEAFPRVTV-SSSLFSLDRDRLTSSGGTAPLDMMLHLIGRDHGH 180

Query: 187 TRALKGLADMLVDETRDSRHALRSLELGACQGRQVQRAQ---ALMRHHLGTPLAVEQLAA 243
             +   ++DM V E   +    + + L    G Q  + Q   ALM  +L  P+ +++LAA
Sbjct: 181 ELSA-AISDMFVYERIRNEQDHQRVPLKHMLGTQQPKLQEIVALMEANLEEPINLDELAA 239

Query: 244 ELGISRRQLDRQFQASHGMSTKAWWLEMRLQQARWRLLNSSHSLAQIADEVGLGDASYLG 303
            + +SRRQL+R FQ     S   ++L +RL +AR  L  +  S+ ++A   G     +  
Sbjct: 240 YVALSRRQLERMFQKYLHCSPSRYYLRLRLIRARQLLKQTPISIVELAVLCGFVSTPHFS 299

Query: 304 KCVRRRFG 311
           KC R  FG
Sbjct: 300 KCYREYFG 307