Pairwise Alignments

Query, 325 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 92/303 (30%), Positives = 136/303 (44%), Gaps = 10/303 (3%)

Query: 27  LRFSADDEDYSQQR-----YCSWMVAGLSLEPVPSSSGAVLQVEAIADQLDLDLFDYLVV 81
           L+  A   D ++QR     Y   ++A  S EPV +S+G  L  E +    D    D LV+
Sbjct: 22  LQVFASTNDLARQRGEPLPYAVSVIAAQS-EPVMTSAGLALVAEPLP-AADAPC-DTLVI 78

Query: 82  FGGRSAMATAALAPRYQALLRQAAKAGVKLVGVDNGAFLLAACGLLQGHKVVVHWRHEAE 141
            GG      AA  P     +R+ AK   ++  V  GAFLLAA G+L G +V  HW    E
Sbjct: 79  AGGWGVYG-AAEDPALVDWVREKAKHTRRMTSVCTGAFLLAASGMLDGCRVATHWTRCEE 137

Query: 142 FRAAFPQLQLLREQLYCIDGNRITCAGGTAAIDLAVALLSRACGRTRALKGLADMLVDET 201
               FP L +    ++   G   T AG TA IDL +AL+    GR  AL+    ++V   
Sbjct: 138 LARKFPSLTVESNPIFIQQGAVWTSAGVTAGIDLCLALVEEDLGRAIALEVARHLVVFLK 197

Query: 202 RDSRHALRSLELGACQ-GRQVQRAQALMRHHLGTPLAVEQLAAELGISRRQLDRQFQASH 260
           R    +  S+ L   +   +     A M  +L   L +  LAA+ G+S R   R ++A  
Sbjct: 198 RPGGQSQFSVTLSLQKDDSRFAELHAWMAENLTLDLNIPTLAAQAGMSERSFVRHYRAET 257

Query: 261 GMSTKAWWLEMRLQQARWRLLNSSHSLAQIADEVGLGDASYLGKCVRRRFGCTALQLRAG 320
           G +       +R++ AR +L +S+ S+ +IA + G G    L +   R    T    R  
Sbjct: 258 GQTPARAVELIRVETARRQLADSTASIKRIAVQCGFGCEETLRRSFLRALSVTPQAYRER 317

Query: 321 HYP 323
             P
Sbjct: 318 FSP 320