Pairwise Alignments

Query, 325 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 315 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score = 99.8 bits (247), Expect = 8e-26
 Identities = 89/308 (28%), Positives = 136/308 (44%), Gaps = 14/308 (4%)

Query: 6   RLLIMPLPDFALLPFGAFLDKLRFSADDEDYSQQRYCSWMVAGLSLEPVPSSSGAVLQVE 65
           R+ ++  P F +L   A      F   +    Q  YC  M++     PV SSSG  +   
Sbjct: 3   RIGVLVFPGFQILDLAAIA---AFELANMHLDQPVYCVEMLSETG-GPVVSSSGVTVD-- 56

Query: 66  AIADQLDLDLFDYLVVFGGRSAMATAALAPRYQALLRQAAKAGVKLVGVDNGAFLLAACG 125
             + +     FD LV+ G  +   T+    +   +LR   ++  ++  +  GAF LA  G
Sbjct: 57  --SKRYTAAKFDTLVMTGSLTITPTSE---KLCQILRSGRRSARRVASICTGAFGLADAG 111

Query: 126 LLQGHKVVVHWRHEAEFRAAFPQLQLLREQLYCIDGNRITCAGGTAAIDLAVALLSRACG 185
           LL G +V  HW    E +   P  ++  ++++  D +  T AG TA IDL +AL+    G
Sbjct: 112 LLDGRRVTTHWAFAQELQRCHPLAKVQPDRIFINDDSLWTSAGMTAGIDLVLALVEEDLG 171

Query: 186 RTRALKGLADMLVDETRDSRHALRS--LELGACQGRQVQRAQALMRHHLGTPLAVEQLAA 243
              A      ++V   R    +  S  LEL     R +Q A A  R HL   L+VE+LA 
Sbjct: 172 VDMARLIAKKLVVYHRRAGGQSQFSALLELEPKSDR-IQLALAYARAHLREGLSVEELAE 230

Query: 244 ELGISRRQLDRQFQASHGMSTKAWWLEMRLQQARWRLLNSSHSLAQIADEVGLGDASYLG 303
              +S RQ  R F+A  G S       +R++ AR  +     +L  +A EVG GD   + 
Sbjct: 231 VAHLSPRQFSRAFKAETGQSPAQAVESLRVEAARALIDEGRLALGVVAQEVGFGDPERMR 290

Query: 304 KCVRRRFG 311
           +   R  G
Sbjct: 291 RAFLRTLG 298