Pairwise Alignments

Query, 325 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 319 a.a., HTH-type transcriptional regulator CdhR from Pseudomonas putida KT2440

 Score =  129 bits (324), Expect = 1e-34
 Identities = 93/303 (30%), Positives = 160/303 (52%), Gaps = 13/303 (4%)

Query: 12  LPDFALLPFGAFLDKLRFSADDEDYSQQRYCSWMVAGLSLEPVPSSSGAVLQVEAIADQL 71
           +P F+ + F + ++ LR +     +  Q Y  W V  L  E V +S+G  +  +A   + 
Sbjct: 14  VPGFSAMGFISAVEPLRVA---NRFGGQLY-RWQVLSLDGEAVLASNGMSINADAALGEG 69

Query: 72  DLDLFDYLVVFGGRSAMATAALAPRYQALLRQAAKAGVKLVGVDNGAFLLAACGLLQGHK 131
           +    + L+V  G   +A   +AP+    LR+     V L G+D GA +LA  GLL+G++
Sbjct: 70  EPA--NILLVVAGFEPLAN--VAPKLLHALRRLNHEAVMLGGIDTGAMVLAEAGLLEGYR 125

Query: 132 VVVHWRHEAEFRAAFPQLQLLREQLYCIDGNRITCAGGTAAIDLAVALLSRACGRTRALK 191
             +HW     F+  +P LQ  +E L+ ID +RITCAGGTA+IDL + L++++ G   A+K
Sbjct: 126 ATLHWEALEAFKERYPGLQATQE-LFEIDRSRITCAGGTASIDLMLHLIAQSHGSELAVK 184

Query: 192 GLADMLVDETRDSRHALRSLELGACQG---RQVQRAQALMRHHLGTPLAVEQLAAELGIS 248
                ++   R  R   + +++GA  G   +++  A   M  H+  PL+  +LAA + ++
Sbjct: 185 VSEQFVLGRIR-QRQDHQRMQIGARYGISNKKLVHAIGEMEKHIEPPLSTLELAAAIKVT 243

Query: 249 RRQLDRQFQASHGMSTKAWWLEMRLQQARWRLLNSSHSLAQIADEVGLGDASYLGKCVRR 308
           RRQL+R F+     +   ++L +RL +AR  L  +  S+ +++   G    SY  +  + 
Sbjct: 244 RRQLERLFRMHLDATPSGFYLGLRLDKARQLLAQTDMSVTEVSLACGFELPSYFTRRYKL 303

Query: 309 RFG 311
           RFG
Sbjct: 304 RFG 306