Pairwise Alignments

Query, 325 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 368 a.a., AraC-family transcriptional regulator from Pseudomonas putida KT2440

 Score =  110 bits (276), Expect = 4e-29
 Identities = 90/313 (28%), Positives = 149/313 (47%), Gaps = 14/313 (4%)

Query: 12  LPDFALLPFGAFLDKLRFSADDEDYSQQRYCSWMVAGLSLEPVPSSSGAVLQVEAIADQL 71
           L +F L+   + ++ LR +      S +    W    +    V +S G  LQ+   A   
Sbjct: 24  LDNFTLISLASAVEPLRMA---NQLSGRELYRWHTLTIDGGQVWASDG--LQITPDAAIS 78

Query: 72  DLDLFDYLVVFGGRSAMATAALAPRYQALLRQAAKAGVKLVGVDNGAFLLAACGLLQGHK 131
           +    D ++V GG     +  +   +   L+  A+   +L  V  G++ LA  GLL G  
Sbjct: 79  NAPPIDTVIVCGGVGIQRS--VTREHVTWLQAQARQSRRLGAVCTGSWALACAGLLDGFD 136

Query: 132 VVVHWRHEAEFRAAFPQLQLLREQLYCIDGNRITCAGGTAAIDLAVALLSRACGRTRALK 191
             VHW   A  + AFP++ +   +L+ +D NR T +GGTA +D+ + L+SR  GR  +  
Sbjct: 137 CSVHWECLAAMQEAFPRVNM-STRLFTLDRNRFTSSGGTAPLDMMLHLISRDHGRELSA- 194

Query: 192 GLADMLVDET----RDSRHALRSLELGACQGRQVQRAQALMRHHLGTPLAVEQLAAELGI 247
            +++M V E     +D +       LG  Q + +Q   ALM  +L  P+ +++LA  + +
Sbjct: 195 AISEMFVYERIRNEQDHQRVPLKHMLGTNQPK-LQEIVALMEANLEEPIDLDELAVYVSV 253

Query: 248 SRRQLDRQFQASHGMSTKAWWLEMRLQQARWRLLNSSHSLAQIADEVGLGDASYLGKCVR 307
           SRRQL+R FQ     S   ++L++RL +AR  L  +  S+ ++A   G     +  KC R
Sbjct: 254 SRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCGFVSTPHFSKCYR 313

Query: 308 RRFGCTALQLRAG 320
             FG      R G
Sbjct: 314 EYFGIPPRDERVG 326