Pairwise Alignments

Query, 325 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 322 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

 Score =  100 bits (248), Expect = 6e-26
 Identities = 80/311 (25%), Positives = 139/311 (44%), Gaps = 13/311 (4%)

Query: 7   LLIMPLPDFALLPFGAFLDKLRFSADDEDYSQQRYCSWMVAGLSLEPVPSSSGAVLQVEA 66
           L  +    F+ +   + ++ LR +    D S ++  SW +  L    + SSS A +  + 
Sbjct: 9   LTFLLFESFSNMVLASAIEPLRAA---RDLSGRQLFSWQLCSLDGNAIISSSRAAIAADL 65

Query: 67  IADQLDLDLFDYLVVFGGRSAMATAALAPRYQALLRQAAKAGVKLVGVDNGAFLLAACGL 126
              ++     D L++  G        L     A +R+ A+    + G+D GA+LLA  GL
Sbjct: 66  PLSRVGAT--DALILVAGYGIRNH--LNQESAAAVRRKARGLPIVGGLDTGAWLLARIGL 121

Query: 127 LQGHKVVVHWRHEAEFRAAFPQLQLLREQLYCIDGNRITCAGGTAAIDLAVALLSRACGR 186
           L G +  +HW  + EF   FP++++  +  Y +DGN +TC    + +  ++ L+ +    
Sbjct: 122 LAGRRATIHWMEKKEFAENFPEVRVT-DAPYVVDGNIVTCGDAQSVLTWSLDLIGKHADE 180

Query: 187 TRALKGLADMLVDETRDSRHALRSLELGACQGR----QVQRAQALMRHHLGTPLAVEQLA 242
                 +A+M     + +   L     G          +QRA  +MR     PL +  +A
Sbjct: 181 ALRFD-VANMFGGVQKSAERTLARGLSGRMSDHGLPAALQRAIVVMRETAEQPLKLPDIA 239

Query: 243 AELGISRRQLDRQFQASHGMSTKAWWLEMRLQQARWRLLNSSHSLAQIADEVGLGDASYL 302
             + +S R LDR F    GMS   ++ ++RL  AR   L ++ +L +IA   G    S L
Sbjct: 240 DRVAVSERSLDRLFHRYLGMSAGQYYSQIRLSHARALALETNLTLYEIAFRTGFSSPSTL 299

Query: 303 GKCVRRRFGCT 313
            +  R +FG T
Sbjct: 300 ARAYRLKFGET 310