Pairwise Alignments

Query, 325 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 346 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

 Score =  130 bits (328), Expect = 4e-35
 Identities = 98/320 (30%), Positives = 155/320 (48%), Gaps = 23/320 (7%)

Query: 12  LPDFALLPFGAFLDKLRFSADDEDYSQQRYCSWMVAGLSLEPVPSSSGAVLQVEA-IADQ 70
           +P F +LPF A ++ LR +     Y+      W ++ L  + V SSSG  L+V+  +AD+
Sbjct: 16  IPQFTMLPFAAAVETLRIANRMLGYAAYE---WRLSSLDGQKVMSSSGICLEVDTCLADE 72

Query: 71  LDLDLFDYLVVFGGRSAMATAA--------LAPRYQALLRQAAKAGVKLVGVDNGAFLLA 122
                    V    R  MA           +     A LR+A   G+ +  +   A +LA
Sbjct: 73  RRY------VSGENRPEMAIICSGIDVDQHVNKSVNAWLREAYNRGIAIGSLCTAAHILA 126

Query: 123 ACGLLQGHKVVVHWRHEAEFRAAFPQLQLLREQLYCIDGNRITCAGGTAAIDLAVALLSR 182
             GLL G +  +HW +   F  AFPQ+++  + L+ +D N  TCAGGTA++D+ ++L+ +
Sbjct: 127 QAGLLNGKRCAIHWENLPGFSEAFPQVEVYAD-LFEVDSNIYTCAGGTASLDMMLSLIGQ 185

Query: 183 ACGRTRALKGLADMLVDETRDSRHALRSLELGACQGRQVQRAQA---LMRHHLGTPLAVE 239
             G     +     L D  R      R L L A  G Q  +  +   LM  +L  PL++ 
Sbjct: 186 DFGENLVNRVCEQQLTDRVRSPNDRQR-LPLRARLGVQNSKVLSIIELMEGNLSEPLSLL 244

Query: 240 QLAAELGISRRQLDRQFQASHGMSTKAWWLEMRLQQARWRLLNSSHSLAQIADEVGLGDA 299
            +A    +SRRQ++R F+   G S   ++LE+RL +AR  L+ S+  + ++A   G   A
Sbjct: 245 DIADAADLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLVQSAMPVVEVAVACGFVSA 304

Query: 300 SYLGKCVRRRFGCTALQLRA 319
           S+  KC R  +  T  Q RA
Sbjct: 305 SHFSKCYREIYNRTPQQERA 324