Pairwise Alignments

Query, 287 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 295 a.a., LysR family regulatory protein CidR from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 72/256 (28%), Positives = 123/256 (48%), Gaps = 9/256 (3%)

Query: 1   MSLKALRTLVTIARHGTFARAADLLSLTPSAVSLHIKTLEDELKVTLFDRSRRQVVLTEA 60
           M ++ LR  V + R  +F RAA+ L +T   +S  +K LEDEL  TL  R  R+++LT+ 
Sbjct: 1   MDIRTLRYFVEVVRQQSFTRAAEKLFVTQPTISKMLKNLEDELNCTLLIRDGRKLLLTDT 60

Query: 61  GQLAVARAESLLAAYDELADALASGPSL-RGRLRLGAIHTVLARRLPKALVWIKAHHPQL 119
           G++   R  ++LA + +L   L+    L +G LRLG I  ++   +   +   +  +P +
Sbjct: 61  GRVVFERGLAILAEFRQLEAELSDINHLNKGVLRLG-IPPMVGMLMAGPISLFRQRYPGV 119

Query: 120 HISVASGMSAELARRVEDGELDAAITTEPVSPYPQNLDFTPLFEDRFWAI---ASPELAG 176
            + ++      + + V +GELD A+T  PV      L    LF      +   +     G
Sbjct: 120 ELKISEFGGLTVQQAVMNGELDVAMTALPVEE-ASGLTTLSLFSHPLCVLVPRSGQWTTG 178

Query: 177 YSV-PQLLASQPFLRFDKRAWAGRQIEQELRRQQVQVSELMELDSQEALARMAVMGLGVA 235
            S+ P+ LA  P L +++     RQ+     +  V+    +     + LA M   G+G+A
Sbjct: 179 DSIAPEALAEHPLLIYNEDFALSRQLMTLFSQHDVKPRIAVRSGQWDFLAAMVQAGVGIA 238

Query: 236 VIPMADDDLQRLPPAT 251
           ++P  +   QRL  AT
Sbjct: 239 ILP--EPICQRLDKAT 252